Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01172 CATTCATTGCTTCAAACTCTCATCCTTCACTGAACGCTTAGTCTCTCCCCGTGTCAATTGCAAGCCATGGAAGCCAGCGCTGGACTTGTCGCTGGGTCTCACAATCGTAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCAAAGCCGTTGAAGAACTTGGACGGTCAAGTTTGTGAGATCTGTGGTGATGAAGTGGGGCTTACTGTGGATGGTGATCTATTTGTTGCCTGCAACGAATGTGGTTTTCCAGTTTGCAGACCTTGCTATGAGTATGAAAGAAGAGAAGGAAGCCAAAATTGTCCTCAGTGTAAAACTAGATATAAGAGACTGAAAGGGAGTCCCAGGGTCGAGGGAGATGACGATGAAGAAGACATAGATGACATTGAACATGAGTTCAACATTGATGATGAGAGGAACAACCATAGTCATGTGGCAGAAGCTATGCTTCATGGCAAGATGAGCTATGGTAGAGGCCCAGATGATGATGAAAATGCACAATATGGAAGAACACAGACAGTGAGTCCAAATGGTGAGCTCCCTTTATCTTCTCAAGGTTATGGAGAGCAGATGTTATCTTCTTCATTGCATAAACGTGTACATCCATATCCAGCTTCTGAACCAGGGAGTACAAGATGGGATGAAAAGAGAGAGGAAGGTTGGAAAGATAGAATGGATGATTGGAAATTGCAGCAAGGCAATCTTGGGCCTGAACCTGATGATGCCAATGACCCTGACATGGCTATGATTGATGCAGCCAGACAGCCACTATCAAGGAAGGTACCAATAGCATCAAGCAAAATTAATCCGTACCGGATGGTTATTGTAGCCCGGCTTGTTATTCTAGCCTTCTTCCTTCGATACCGGATTCTAAATCCAGTGCATGACGCATTGGGTTTATGGCTAACTTCTGTGATATGTGAAATCTGGTTTGCATTTTCATGGATCCTTGATCAGTTCCCCAAATGGTTCCCAATCGATCGTGAAACCTACTTGGATCGTCTATCCTTAAGGTATGAACGAGAGGGCGAACCTAATTTGCTTGCTCCAGTAGACATCTTTGTCAGTACTGTAGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCCATGGACTATCCAGTTGATAAGATTTCATGCTATGTCTCGGACGATGGAGCTTCCATGCTTACCTTTGAAGCAATGTCTGAAACTGCAGAATTTGCAAGGAAATGGGTGCCTTTTTGTAAGAAGTTCTCCATAGAACCACGAGCACCTGAAATGTACTTCTGCGAGAAGATTGATTATCTCAAGGATAAAGTCCAACCCACATTTGTGAAGGAGCGTCGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTCAGAATAAATGCTCAAGTAGCAAAAGCCACGAAAGTTCCTACAGAGGGATGGATAATGCAAGATGGAACACCGTGGCCAGGCAACAACACAAAAGATCATCCTGGTATGATCCAAGTCTTTCTAGGTCACAGTGGAGGCCTTGATGCAGAAGGGAATGAACTACCCCGCCTAGTTTATGTGTCTCGTGAGAAAAGACCAGGTTTCCAGCATCACAAGAAAGCTGGTGCCATGAATGCCTTGATTCGTGTCTCTGCAGTGCTTACAAATGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCAGCACGAGAGGCCATGTGTTTCCTTATGGACCCTCAAGTTGGAAAAAAAGTCTGTTATGTACAATTTCCACAAAGATTTGATGGAATAGATCGGCATGATCGTTATGCCAACAGAAACACAGTCTTCTTTGATATTAACATGCGAGGTTTAGATGGAATTCAGGGACCTGTATATGTCGGCACTGGGTGTGTCTTTAGGAGGCAAGCTTTATACGGTTATGAACCCCCAAAAGGTCCTAAGCGCCCAAAAATGGTAAGCTGTGATTGTTGTCCATGCTTTGGACGTCGCAAGAAGCTCAAGAACTCTGGGGCAGATGGAGATGTTGCAGTGCTGGCAGATGACAAGGAGCTACTGATGTCACAAATGAATTTCGAAAAGAAATTCGGACAGTCATCAATTTTTGTTACCTCTACTTTGATGGAAGAAGGTGGTGTTCCGCCCTCCTCTAGCCCAGCAGCCCTGCTTAAGGAAGCAATTCATGTTATCAGTTGTGGTTATGAAGACAAAACCGAATGGGGTACCGAGTTGGGCTGGATTTACGGATCTATCACAGAAGATATTCTAACTGGTTTCAAAATGCATTGTCGTGGCTGGAGATCCATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCCATCAACTTGTCTGATCGGCTGAACCAGGTGCTTCGGTGGGCACTCGGGTCTATTGAAATCTTTTTCAGCAACCACTGCCCTGTTTGGTATGGCTATAAGGGTGGGAAGCTAAAGTGGCTCGAGAGATTTGCATATGTCAACACAACTGTCTACCCCTTCACTTCAATACCACTTCTCGCCTATTGTACCCTCCCTGCAATCTGCCTACTCACGGATAAGTTTATCATGCCACCGATAAGCACTTTTGCAAGTCTCTTCTTCATTGCCTTGTTTCTTTCCATTTTTGCTACGGGTATTCTTGAGCTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTATACAAGGTCTGTTGAAGGTATTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCAACAGACGACGAAGACTTTGGAGAATTATATGCCTTCAAATGGACAACCCTGCTAATCCCTCCAACAACTATTTTGATCATCAACCTTGTGGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGGTATCAATCATGGGGACCTCTCTTTGGGAAGCTTTTCTTCGCCTTCTGGGTGATTGTTCATCTTTACCCATTCCTTAAGGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCTGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTCCGAATTGATCCATTTGTGATGAAAACAAAGGGACCTGATACCAAGAAATGTGGACTAAATTGCTGAAAGACTTCCTCTCTTTCTTGTTATTTGATGTGTGCATCACCAGAAGATTCATGTGCATATCCAGGAGATTTATATGCATGGACAGTGCACATAGAATATGTGAACTAAAAGTATGTGAAGCACAAGAATGAAAAAAAGTAAGAGTGAAATTTTTGTGTAGTATGACAATGTACCTAGTTTTGTGGACAAATGAAGATAACGTGTCTGTACTTTGTTTAATTCAGTTTGTACACAAAACAAATCTTCATATAGAAAATTACGATATTGTACTTGTACCTT 3444 43.35 MEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQNCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDERNNHSHVAEAMLHGKMSYGRGPDDDENAQYGRTQTVSPNGELPLSSQGYGEQMLSSSLHKRVHPYPASEPGSTRWDEKREEGWKDRMDDWKLQQGNLGPEPDDANDPDMAMIDAARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNLLAPVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKISCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKATKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQVGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKLKNSGADGDVAVLADDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASLFFIALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVIQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKKCGLNC 1032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33357759 33362573 + XM_039034021.1 Bhi06g01172 37511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01172 1032 Pfam Cellulose synthase 329 1026 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi06g01172 1032 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Bhi06g01172 1032 SUPERFAMILY RING/U-box 21 107 - -
Bhi06g01172 1032 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Bhi06g01172 1032 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Bhi06g01172 1032 MobiDBLite consensus disorder prediction 144 170 - -
Bhi06g01172 1032 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 444 620 IPR029044 -
Bhi06g01172 1032 Pfam Zinc-binding RING-finger 27 103 IPR027934 -
Bhi06g01172 1032 SUPERFAMILY Nucleotide-diphospho-sugar transferases 342 856 IPR029044 -
Bhi06g01172 1032 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 1 1032 - -
Bhi06g01172 1032 MobiDBLite consensus disorder prediction 133 170 - -
Bhi06g01172 1032 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1032 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01172 Bhi-Chr6:33357759 Bhi09g00640 Bhi-Chr9:13698495 0 dispersed
Bhi10g01407 Bhi-Chr10:33489141 Bhi06g01172 Bhi-Chr6:33357759 1.49E-148 dispersed
Bhi10g01408 Bhi-Chr10:33489141 Bhi06g01172 Bhi-Chr6:33357759 1.44E-148 dispersed
Bhi06g01172 Bhi-Chr6:33357759 Bhi06g01173 Bhi-Chr6:33357759 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01172 K10999 - csv:101214842 2066.97