Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01185 TAAAGGGATTTTCAGTCTATATGTTTGATTGGTTATGTTGAAGTCTAATAGAGTTTTCTTACAGAGGAGGAATTGGAAGATGGCATCGAGTTCCTCGAATTCGCCCTGTGCAGCTTGCAAATTTCTCCGGCGGAAATGCCAACTGGAATGTGTTTTTGCGCCGTATTTTCCGCCGGATCAGCCACAAAAATTCGCGAATGTTCATAAGGTATTCGGAGCCAGTAATGTAACAAAACTTCTCAATGAATTGCATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCCTATGAAGCCGATATGCGCCTTCGTGACCCCGTCTATGGCTGCGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCCGAACTATCTAAATATCAAAACCTAGGCATCGGAAACCACGCCGCTCTGATTTCGCCGCCTTCCGCAGTTTCCACCGTCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGCCTCTATCACGATCAATTTTTCCCTCGAGATCAACAACAACAGCAGATGATGCTCCGACGGAGCTTCGACGGCGGAAGCAACTACGACGGACTTTTGTCCGTCAACGTCACCGCCAGTATTGGCAACCTCAGCCACCAGTTCCAGCAATCTCGTGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTCGTTTCTTTTCTTTTTCTTTTCTTTTTTTTTTTTCCTGAAAAATCATAAACTATTGCAGAGAAATCATATACAGCTAATTATCCTGC 833 46.94 MLKSNRVFLQRRNWKMASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQMMLRRSFDGGSNYDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34030228 34031122 + XM_039033661.1 Bhi06g01185 37524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01185 233 Pfam Lateral organ boundaries (LOB) domain 24 121 IPR004883 -
Bhi06g01185 233 ProSiteProfiles LOB domain profile. 23 124 IPR004883 -
Bhi06g01185 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 198 - -
Bhi06g01185 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 17 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00551 Bhi-Chr6:12401586 Bhi06g01185 Bhi-Chr6:34030228 1.11E-57 dispersed
Bhi06g01185 Bhi-Chr6:34030228 Bhi10g02237 Bhi-Chr10:58152963 6.32E-59 dispersed
Bhi06g01184 Bhi-Chr6:34029637 Bhi06g01185 Bhi-Chr6:34030228 4.01E-165 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1383 PF03195 LOB 3.80E-42 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01185 - - csv:101203281 409.453