Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01200 TTCGCCCTTATAAGACACCTCCCAATTTCAGCAACTCTTTCCTGCAAAGCCACTCTCCTCCTCTCCATCGCCGCCGTATCCTCCGGCCGTCCGTCCGATTCGCCGCCGATGGAGAACATTCTCGACGAGTATCGGTATTACTGGGAAACGAATATGTTCCTGCAGACGGAAGAATTCGACAGTTGGGGATTGGATGAAGCATTTTACGGTTCTTACGATTCGAGCTCGCCGGACGGAACGTTATCATCGTTAGAAGCGTCGAAGAACATCTTATCAGAGAGGAATCGGAGGAAGAAGCTCAACGATAGGCTTCTTGCTCTCAGAGCTGTGGTCCCTAATATCACCAAAATGGACAAGGCGTCGATAATAAAAGACGCGATCGAGTACATTCAAGAGCTCCGAGCGCAAGAGAAGAGAATCGAATCGGAGATTTCAGACCTCGAATCAGGCAAAATCAATAACACAGCAACAAATGACGACGACGACGGCGGAAACGGCAATCGAATCTCTAGGAAGAGGAGAACGAAGAATTGTAATCGGCGAGTAGAAGAGAAGTCGCCGTCGTCATTCCCGATCGAAATTCTCGATTTGAACGTGAATTACATGGGGGAGAAGACGATGGTAGTGAGTATGACATGTGAAAGAAGAAACGACGCCATATTGAAAGTTTGTCAAGTGATTGAATCGCTGAAACTCAAGATTATTGCGGCCNTCACCGTCGTTGCCAACAGGCTTCTCAACACGCTCTTCCTTGAGGCAGAGAGAGCAGAGGAAGAGGAACTTAAGATAAAAATAGAAACAGCAATTGCAGCAATTAGTGATCAACAAAATCCTATGAGCATTTGATAAATCCCATAGGACTTCTTTTGTGGCTCAACTTTGTCATCTAATTATTTTTTCTATTAGAGTTGTTTCTCTTTGTTCTCTCTCTCTAGCTCTTTTTCTTTTGGAAAAGAAATCATAAAAAATATTCTCTTCCTCACCCAATCAAAGAAATAAAAGAG 1004 44.22 MENILDEYRYYWETNMFLQTEEFDSWGLDEAFYGSYDSSSPDGTLSSLEASKNILSERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIESEISDLESGKINNTATNDDDDGGNGNRISRKRRTKNCNRRVEEKSPSSFPIEILDLNVNYMGEKTMVVSMTCERRNDAILKVCQVIESLKLKIIAAXTVVANRLLNTLFLEAERAEEEELKIKIETAIAAISDQQNPMSI 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34968400 34978601 - XM_039033834.1 Bhi06g01200 37539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01200 245 MobiDBLite consensus disorder prediction 113 127 - -
Bhi06g01200 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 112 IPR036638 GO:0046983
Bhi06g01200 245 MobiDBLite consensus disorder prediction 113 138 - -
Bhi06g01200 245 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 239 - -
Bhi06g01200 245 PANTHER TRANSCRIPTION FACTOR BHLH35 1 239 - -
Bhi06g01200 245 Coils Coil 215 235 - -
Bhi06g01200 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Bhi06g01200 245 Coils Coil 87 114 - -
Bhi06g01200 245 SMART finulus 54 103 IPR011598 GO:0046983
Bhi06g01200 245 Gene3D - 47 114 IPR036638 GO:0046983
Bhi06g01200 245 Pfam Helix-loop-helix DNA-binding domain 55 97 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00701 Bhi06g01200 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00701 Bhi-Chr2:14199344 Bhi06g01200 Bhi-Chr6:34968400 5.41E-70 dispersed
Bhi02g00702 Bhi-Chr2:14199344 Bhi06g01200 Bhi-Chr6:34968400 6.14E-70 dispersed
Bhi06g01200 Bhi-Chr6:34968400 Bhi10g00134 Bhi-Chr10:2938171 2.24E-21 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1384 PF00010 HLH 7.40E-11 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01200 - - cmo:103492501 364.385