Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01274 ATGCACTCCTTCGCCGCCGGTTGGCCCGGCGTCTGGCTCTGCGAGGTCTGCGAGCAAGCTCCGGCCACCATCACCTGCAATGCCGACGCTGCTGCCCTCTGCCCTTCCTGCGATGCTGACATCCACTCTGTTAACCCCCTCGCTCGTCGCCACGACCGCTCTGCTATTCAACCCTTCTACGACTCTCCCCCGTCTGCCACTGTCGCCTCTGTCTTCAAATTCCTCATCCCAACCGAACCCCAACACGATGCCGTTCACCCCGATTTGAAATCGGAGGATGTCTTCTTCTCCGATATGGATTCATTGATTGATTTTGATTACCCGACTGCTGGTGATGGAGTTGTTCCTGAACAATCCAATCCAGGAACAGAGTCCACTACGCCGCCCACCGATTACCCCACTAGAAATTTCTGCGGCTTTGAGCTCTGTAGTACTCGATCTAAACTCGACGCCATTAGCTACCCATCTCAGAATCTTAGCCATAGCGTTTCTTCGTCTTCTTTAGACGTGGGAGTCGTGCCGGATCAGAACACAGCCTCCGACGCGTCGTTTCCGGTGGGGCAGATGGCGGAGAAGGCGGTGCAATTGCGGGGGATGGATCGGGAGGCGAGGGTGTTGAGGTACAGAGAGAAGAAGAAGAACAGGAAATTTGAGAAGACGATTCGGTATGCTTCGAGGAAAGCTTATGCTGAAATTCGGCCGAGGGTTAAAGGGAGGTTCGTTAAACGGAGTGAAACGAACTGTGAAATTGACAGAATCTTCGCCGGCGCCGGCGTCGGATTCATCATAAACGATGGACGATACGGCGTCGTTCCGAGCCTTAGAGTTTGAGGAAGTGAGACGAGTGGGGCCTACGGGAATTTGTGAGACCCTGTTTGTTGGTTTTTTAAGCCTTCAGGGTCTGATTTGGAATATAATTCCCATGTAATTTCAAATAATTTTCAAATAAAATAATTGTTTAAATGGGTGACTGAAATATAAATTATGAAA 990 50.81 MHSFAAGWPGVWLCEVCEQAPATITCNADAAALCPSCDADIHSVNPLARRHDRSAIQPFYDSPPSATVASVFKFLIPTEPQHDAVHPDLKSEDVFFSDMDSLIDFDYPTAGDGVVPEQSNPGTESTTPPTDYPTRNFCGFELCSTRSKLDAISYPSQNLSHSVSSSSLDVGVVPDQNTASDASFPVGQMAEKAVQLRGMDREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRVKGRFVKRSETNCEIDRIFAGAGVGFIINDGRYGVVPSLRV 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38320092 38321200 - XM_039033384.1 Bhi06g01274 37613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01274 276 Pfam B-box zinc finger 12 54 IPR000315 GO:0008270
Bhi06g01274 276 MobiDBLite consensus disorder prediction 111 131 - -
Bhi06g01274 276 SMART bboxneu5 9 56 IPR000315 GO:0008270
Bhi06g01274 276 ProSiteProfiles Zinc finger B-box type profile. 13 56 IPR000315 GO:0008270
Bhi06g01274 276 MobiDBLite consensus disorder prediction 116 131 - -
Bhi06g01274 276 ProSiteProfiles CCT domain profile. 201 243 IPR010402 GO:0005515
Bhi06g01274 276 CDD Bbox1_BBX-like 13 56 - -
Bhi06g01274 276 Pfam CCT motif 201 243 IPR010402 GO:0005515
Bhi06g01274 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 11 273 IPR045281 GO:0009909
Bhi06g01274 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 11 273 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00794 Bhi06g01274 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00075 Bhi-Chr4:1964514 Bhi06g01274 Bhi-Chr6:38320092 6.35E-58 dispersed
Bhi06g01274 Bhi-Chr6:38320092 Bhi10g01287 Bhi-Chr10:30472702 5.87E-06 dispersed
Bhi02g00794 Bhi-Chr2:16495557 Bhi06g01274 Bhi-Chr6:38320092 7.02E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1393 PF06203 CCT 1.30E-17 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01274 - - bhj:120079223 548.125