Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01405 AAGAGGCACCTGCTGTTGCTCATCAGTTCTCCGTTTTCCTCCGCTTTACGCGTTCGAGCCATTCCCGAAGATTTAGTGTTGTCTGTGTGTTCCTTTTATCCACCTGAGAATCCATTTCCAATTCCGTCTTTCACTGGTCTGTTTTGATTTCCACTTTCTCTCCCTCTCTCTCTATCTGTGCGCCATGGACTGAGCTGACGGTTTCTGATTGTGATGCTTGTAGAAAATGTTTGATTGTGGCTACAAGTCACAACTGATGGGTGGTCAGCGAGAAAAGTTTGTGAGGTTGGATGACTTGGATTCCCGATTGTCATCGCCTTCTGATGGTGGAATGAGAAGATGCGGGTTTAATATAGATGGATTTAACCGTGCAGTCCATGCAAATGAAAAGCCATCTGGATCCTTTAAGAGAGGAATGAGGAAAGGCTCGGAAGGACTTAAATCAATTGGCCGATCACTCAAGTTTGGGGTGTCTCGAGCTGTATTTCCAGAGGATCTTAAAGAGTCAAAGAAGAAAATCTTTGATCCTCAAGACAAATTGCTCTTATTTTTGAATAAACTTTTTGTCATATCATGTATTTTGGCAATATCTGTGGACCCACTATTCTTTTATGTTCCTGTCATTAACCCAAGCTCAAACTGTCTTGGCATTGATAGAAAGCTGGCAATTACAGTGACAACATTGCGGACCATCATTGATGTTTTCTATCTTATTCATATGGCTCTCCAATTCCGGACAGCTTATATTGCTCCATCATCTCGGGTGTTTGGGAGAGGTGAACTTGTGATTGATCCTGCACAAATAGCAAAGCGATACTTGCGGCGGTATTTCATCATTGACTTGGTGTCTGTGCTGCCCCTTCCACAGATTGTGGTTTGGAGATTTCTTCAAAGGTCAAAAGGTTCAGATGTATATGTGACAAAACAGGCCCTTCTTTTAATTGTATTCCTTCAATATATCCCAAGGTTTTTTAGAGCAGTACCATTGACTTCAGAGTTGAAAAGGACAACAGGCGTTTTTGCAGAAACTGCTTGGGCAGGTGCTGCATATTATTTGCTATTATATATGCTTGCAAGTCATATAGTAGGAGCATTATGGTACTTGTTAGCTGTGGAACGCAATGATACATGTTGGCAGAAGTATTGTAATGCCCCTATTTGCAGGAAAGATTTCTTGTATTGTGGTAACCAAGACATGAAAGGTTATGCAACTTGGAACCAGACAGGTGTGGCTGACCTTAAGTCAAGTTGCAAACCTGCTGATGAAAATGATCAGTTTGATTTTGGAATCTTTCAACAGGCGTTGTCCTCTGGTATTGCCGCCTCCAAGAATTTTATCGCTAAATATTGTTACTGTCTGTGGTGGGGACTACAAAACTTGAGTACGCTTGGGCAGGGGCTTCAAACAAGCACGTACCCGGGTGAAGTGATCTTTTCTATAGCATTAGCTGTACTTGGTCTCATTCTCTTTGCCCTTCTTATCGGCAACATGCAGACTTATCTTCAATCTCTAACTATAAGGCTTGAGGAAATGAGGGTGAAAAGGCGCGATTCAGAGCAGTGGATGCATCACCGCTTGCTGCCGCAAGATCTTCGGGAGAGAGTCAGGCGTTACGATCAGTACAAGTGGTTAGAGACTCGCGGGGTGGATGAACAGAGTTTGGTTCAAACTCTACCTAAGGATCTCAGGAGAGATATTAAGCGGCATCTTTGTCTGGCTTTAGTAAGAAGGGTTCCTCTGTTTGAAAGCATGGATGAGAGGCTGCTTGATGCTATCTGTGAGCGGCTGAAACCATGTTTGTTTACGGAGTACACTTACATAGTTCGTGAAGGTGATCCAGTTGATGAGATGCTCTTCATTATACGTGGTCGGCTCGAGAGTGTGACCACAGATGGTGGGCGGAGTGGATTTTTCAACCGTACCTTTCTGAAAGAAGGTGATTTTTGTGGTGAAGAGCTTTTGACCTGGGCTTTGGACCCGAAATCTGGTTCGAATCTTCCATCTTCTACAAGGACGGTAAAGGCTATTACAGAGGTTGAGGCTTTTGCCCTCGTTGCTGAAGAGTTGAAATTTGTGGCCAGTCAGTTCAGGCGCCTTCACAGTAGACAGGTGCAACATACGTTCCGATTCTACTCACAACAGTGGAGGACCTGGGCTGCTTGCTTCATTCAAGCGGCATGGCGTCGGTATTCCAAGAGAAAATCTATGGAACTTCGTCAAAAGGAAGAAGTTGCCGCAGAAGAATCTGAGGGATCTCAAACTGCTACAAGCGGAGGCTCTTATAGTATTCGTGCAACTTTCTTAGCTTCCAAATTTGCTGCCAATGCTCTCAGGGGCGTTCAACGATATCGGAACGCAAAGAGCGCTCAGGAATTGATAAAATTGCAGAAGCCTCCAGAGCCAGATTTTAGCGCTGATGATGCAGATTGATCCATTATGTATTGTGACAAAAATTGAATGTATTATTATCTGACTCATGGTTTTTATTTTGAAATTGATTAGGTGGGGTGAAACTAATGTATTATAGATGTGCTTGTAGTTTGTAACTTGTAAAAAAGTTCCTGAAATCAATCTGGAATATGTATTTTATTTGTGCTTTATATTTTATTTCGAAGGCTTCTGCATACCAGGTTGGAAGCTAATGGACAGAGGGATTCTCTAA 2663 42.92 MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDGGMRRCGFNIDGFNRAVHANEKPSGSFKRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKKKIFDPQDKLLLFLNKLFVISCILAISVDPLFFYVPVINPSSNCLGIDRKLAITVTTLRTIIDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRRYFIIDLVSVLPLPQIVVWRFLQRSKGSDVYVTKQALLLIVFLQYIPRFFRAVPLTSELKRTTGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAVERNDTCWQKYCNAPICRKDFLYCGNQDMKGYATWNQTGVADLKSSCKPADENDQFDFGIFQQALSSGIAASKNFIAKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAVLGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEQSLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEYTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAITEVEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKSMELRQKEEVAAEESEGSQTATSGGSYSIRATFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSADDAD 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 42551630 42571238 - XM_039034232.1 Bhi06g01405 37744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01405 734 SMART cnmp_10 505 636 IPR000595 -
Bhi06g01405 734 ProSiteProfiles IQ motif profile. 641 670 IPR000048 GO:0005515
Bhi06g01405 734 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 731 - -
Bhi06g01405 734 SUPERFAMILY cAMP-binding domain-like 434 625 IPR018490 -
Bhi06g01405 734 Gene3D - 110 430 - -
Bhi06g01405 734 Pfam Ion transport protein 109 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi06g01405 734 Gene3D Jelly Rolls 503 623 IPR014710 -
Bhi06g01405 734 PRINTS EAG/ELK/ERG potassium channel family signature 154 164 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi06g01405 734 PRINTS EAG/ELK/ERG potassium channel family signature 165 174 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi06g01405 734 PRINTS EAG/ELK/ERG potassium channel family signature 282 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi06g01405 734 PRINTS EAG/ELK/ERG potassium channel family signature 400 411 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi06g01405 734 PRINTS EAG/ELK/ERG potassium channel family signature 418 427 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi06g01405 734 PRINTS EAG/ELK/ERG potassium channel family signature 468 475 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi06g01405 734 ProSiteProfiles cAMP/cGMP binding motif profile. 505 589 IPR000595 -
Bhi06g01405 734 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 731 - -
Bhi06g01405 734 Pfam Cyclic nucleotide-binding domain 530 615 IPR000595 -
Bhi06g01405 734 CDD CAP_ED 505 636 IPR000595 -
Bhi06g01405 734 SUPERFAMILY Voltage-gated potassium channels 101 427 - -
Bhi06g01405 734 Gene3D Helix hairpin bin 433 496 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01405 Bhi-Chr6:42551630 Bhi11g03048 Bhi-Chr11:82817683 0 dispersed
Bhi06g01405 Bhi-Chr6:42551630 Bhi12g00625 Bhi-Chr12:19116777 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01405 K05391 - csv:101219180 1377.07