Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01461 ATGGCGTCGAGGAACCGGACTTTGATTTTTAGGAAATACAGGGACGCGTTGAGGAGTGTGAGGGTTCCTACCAGCTCTTCGCCTGTTTCTGCATCGCCAACGACTAGCTCTGCCGCTGGTGGCCCGGTGATCGAATTGGTTAGTTCGTCGTTGCTGCATCCGAATCGGTCGTACGCTCTCTTAAGTACCGAGGATCCGGGTAATTCAAGTAAGGGTGCTCTTACGGTGGGTCTACCTCCGGCTTGGGTGGATGTATCTGAAGAAATAGCTGCAAATGTGCAGCGTGCACAAGTGAAGATGATGGAGTTAGCTAAAGCTCATGCAAAGGCTTTAATGCCTTCATTTGGAGATGGTAAAGAGGATCAACGATTAATTGAATCTCTCACGCAGGATATAACTAATTTAATCAAGAAATCAGAGAAAGGACTCAAGAGGCTCTCTGTAGCTGGACCTTCGGAAGATTCCAATATCAGAAAAAATGTTCAGCGATCTCTTGCCACTGATCTTCAGAACCTTTCCATGGAGCTTCGCAAGAAACAGTCAACTTATTTAAAGCGCCTACGGCAGCAAAAAGAGGAAGGTCAAGATGGGATTGATATAGAGATGAATCTAAATGGAAATAGATCGAGAATGGAGGACGATGATTTAGAACATATGGTATTTAATGAGCATCAGATGGCTAAGCTGCGAAAAAGTGAAGCATTCACTGCCGAAAGAGAGAGAGAGATCCAACAAGTTGTAGAATCCGTGAATGAGCTTGCTCAGATCATGAAGGATCTATCTGTACTTGTCATAGACCAGGGTACTATTATTGATAGAATAGATTACAATATTCAAAATGTTGCGACGACTGTTGATGAGGGCCTTAAGCAACTGCAGAAGGCAGACAGAACACAAAAACAAGGAGGGATGGTGATGTGCGCGTCTGTGCTCATTATCATGTGCTTCGTCATGTTGGTTCTTTTGATCCTTAAAACCATACTATTTTGATCCTCAAGCATATAATTCCAGATAATGCATAGTTACCTACATTGTTCCCCGGAGACCTTTACACAAAAGTTCATGGCGTTTCCAGGCCAATCAGAAATTCTTAAGCACATAGGACTCATTCCTGTTGGCGTTTCCCGGCCAGGGAAGGGGGAGGGATTTAGCTTCTTGAATTATAGAGTTATGGTGGTGGACGGTATATTTTGTATAGAGATTGATTGAGCATTGGAAACTTCCCATTGATAATTCTTTTGATTTTCACGAGTTTTTATAGAAGAA 1266 43.05 MASRNRTLIFRKYRDALRSVRVPTSSSPVSASPTTSSAAGGPVIELVSSSLLHPNRSYALLSTEDPGNSSKGALTVGLPPAWVDVSEEIAANVQRAQVKMMELAKAHAKALMPSFGDGKEDQRLIESLTQDITNLIKKSEKGLKRLSVAGPSEDSNIRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEEGQDGIDIEMNLNGNRSRMEDDDLEHMVFNEHQMAKLRKSEAFTAEREREIQQVVESVNELAQIMKDLSVLVIDQGTIIDRIDYNIQNVATTVDEGLKQLQKADRTQKQGGMVMCASVLIIMCFVMLVLLILKTILF 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 44337557 44341019 + XM_039033901.1 Bhi06g01461 37800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01461 329 SMART tSNARE_6 228 295 IPR000727 -
Bhi06g01461 329 ProSitePatterns Syntaxin / epimorphin family signature. 239 278 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi06g01461 329 PANTHER SYNTAXIN 1 324 IPR045242 -
Bhi06g01461 329 SMART SynN_4 73 188 IPR006011 GO:0016020
Bhi06g01461 329 SUPERFAMILY t-snare proteins 78 288 IPR010989 GO:0016020|GO:0016192
Bhi06g01461 329 Pfam SNARE domain 269 321 IPR000727 -
Bhi06g01461 329 Gene3D - 79 287 - -
Bhi06g01461 329 CDD SNARE_syntaxin16 237 294 - -
Bhi06g01461 329 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 233 295 IPR000727 -
Bhi06g01461 329 PANTHER TARGET SNARE COILED-COIL-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 1 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01461 Bhi-Chr6:44337557 Bhi09g00937 Bhi-Chr9:21127075 2.09E-139 dispersed
Bhi06g01461 Bhi-Chr6:44337557 Bhi03g01774 Bhi-Chr3:37337842 5.35E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01461 K08489 - csv:101207998 578.941