Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01506 ATTGAGTTCCACAAGCTTAAGTTGTTAAATTATAACAAACAAAAGTTACAAGTTTTCCAACTGTTGTGTCCATACTTCTTCCATTTAGCATTCGATATGTCATAGATATTATATCATTTTGTTTCATGAACTGTACCGCTTTTTATATGCTTCTTTTACGATAAACAATGAATGAAGGTAGCATGAATTTTCTTTTTGTAACAAGTAAAAGGGTTTGTTAAATATTCTAACAAAAAGAATCCTACAAGCACACCTTGTTAAGTTCAGAATGAGTATTATGACAAAAATGGAATCCCCCCTTAAATTTAGCTGGCTGATAACAATATTTCTTAGTATCATCATTATTATATCAGTATCTTTATTTTCTTTTTCTTTTTTCTTTTTATAACCTAAACTTTCCTCTCACTTAACAGTCATGTCTCCAGTTTCTCTCTAGGGGTTTTTGAAGTAAAGACAGAAAATTCAATCTTCCAAGCTTTGAAGTTTGAGGAAATGGAAGAGTTTTACAGGCTTAACAACTCTGTTATAGCCTCATATTCTAATAGTGTTGTTGGAGGTGAAGCCATTGCAAGCACCAGCTGTGGTGGGATTCATGAAGCTTTAATGGTGGATGATGATATGCTTCACCTTGAAGCTGAGGCCACCACTGGTTCGAACATGTCTAACATGATCAAAACTCAAATTGTCAACCATCCCCTTTATCCCAAACTGGTTTCTGCTTACGTTGAATGCCAAAAAGTTGGGGCTCCACCACAAGTAGCCTCTCTTCTTGAAGAAATTGGCCGTGAAAATCACCCTCCTAGATCTTCTATTGAGTTGGGAGCTGATCCTCAACTGGACAACTTCATGGAGTCTTACTGTGAGGTTCTTCATCAATATAAGAATGAGCTATCCAAACCATTTGATGAAGCAACAATGTTCTTGACCAACATTGAATTGGAGCTAAGCAACCTGTGTAAAGGATCGTTTACTGTGACGTCGGATTCTCACTCCACCATGAATGACGAAGTAGCCGGGACGCCGGAGGAAGAACCGAGCAGCTATGGGCAGGTGAAAATGCCGGGAAACCACGAGTCGTTCTGCATGCGAAAAACAAACCAAGACCTCAAAGAAATGCTGCTGAAGAAATACAGTGGCTATCTCAGCAGTTTGAAGAAGGAATTCTTGAAGAAGAGAAAGAAAGAGAAGCTGCCAAAAGATGCAAGAATGGCTTTACTTGACTGGTGGAATACTCATTACAAATGGCCTTATCCTACAGAGGAGGAAAAATCAAAACTATCTGTTATAACTGGTCTAGACCAAAAGCAAATCAATAACTGGTTCATAAACCAGAGAAAGCGACATTGGAAGCCGCCCGAAGATATGCGATTTGTGCTCATGGACGGAGTCGGGGTCGGAGAATGCATCAAAGGATCAAATTTTTATGACAATGGAGAGACTGGTGGCCATGTAATTTGATATGATTTAGCTTCTTGTCTACTTTTACAAATTGTTGCTGCTTTCTAGTTTCTTTATGTACATCTTCTATTCTTCCCTTTTTTTCTTTGGTTATAGACTCTGAATTTCTTTCTGACTTAGACAGATACACAAATATATAGAAATCACT 1606 37.92 MEEFYRLNNSVIASYSNSVVGGEAIASTSCGGIHEALMVDDDMLHLEAEATTGSNMSNMIKTQIVNHPLYPKLVSAYVECQKVGAPPQVASLLEEIGRENHPPRSSIELGADPQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTVTSDSHSTMNDEVAGTPEEEPSSYGQVKMPGNHESFCMRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLDWWNTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVGVGECIKGSNFYDNGETGGHVI 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 45026591 45030268 - XM_039033813.1 Bhi06g01506 37845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01506 321 Pfam ELK domain 204 225 IPR005539 GO:0003677
Bhi06g01506 321 ProSiteProfiles ELK domain profile. 204 224 IPR005539 GO:0003677
Bhi06g01506 321 CDD homeodomain 236 287 IPR001356 GO:0003677
Bhi06g01506 321 SMART HOX_1 226 291 IPR001356 GO:0003677
Bhi06g01506 321 SMART KNOX1_2 58 102 IPR005540 GO:0003677|GO:0005634
Bhi06g01506 321 SUPERFAMILY Homeodomain-like 226 296 IPR009057 -
Bhi06g01506 321 MobiDBLite consensus disorder prediction 166 186 - -
Bhi06g01506 321 Pfam KNOX1 domain 60 101 IPR005540 GO:0003677|GO:0005634
Bhi06g01506 321 Pfam Homeobox KN domain 244 283 IPR008422 GO:0003677|GO:0006355
Bhi06g01506 321 Pfam KNOX2 domain 109 155 IPR005541 GO:0003677|GO:0005634
Bhi06g01506 321 ProSitePatterns 'Homeobox' domain signature. 262 285 IPR017970 GO:0000981|GO:0006355
Bhi06g01506 321 ProSiteProfiles 'Homeobox' domain profile. 224 287 IPR001356 GO:0003677
Bhi06g01506 321 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 10 1 298 - -
Bhi06g01506 321 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 298 - -
Bhi06g01506 321 Gene3D - 222 293 - -
Bhi06g01506 321 SMART ELK_2 204 225 IPR005539 GO:0003677
Bhi06g01506 321 SMART KNOX2_2 105 156 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01506 Bhi-Chr6:45026591 Bhi09g03182 Bhi-Chr9:81520335 8.51E-72 dispersed
Bhi06g01506 Bhi-Chr6:45026591 Bhi07g01752 Bhi-Chr7:48154438 2.29E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1404 PF03791 KNOX2 3.70E-21 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01506 - - csv:101203403 580.096