Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01558 GATGAATAAGGAGACTGATTTCATTCCAAACTACCCTAACCTTCCTTCAAAGTTGATCTGCATGCTCCACAATGTCACATTACATGCTGATCCTGAAACGGATGAAGTGTATGCACAAATGACCCTTCAACCAGTGAATAAAAATATTCTGACTTTCTGTTTTGCAGTATGAAAAAGAAGCTTTATTGGCATCTGATATTGGCCTCAAACAAAGCAGGCAGCCTGCAGAATTCTTCTGCAAAACTCTAACAGCTAGTGACACCAGCACTCATGGTGGATTTTCTGTGCCTCGTCGTGCAGCTGAGAAGATTTTCCCCCCATTAGACTACTCGATGCAACCCCCTGCTCAGGAATTAGTGGCTAGAGATTTGCATGATAATTCATGGACATTCAGACATATTTACCGCGGCCAACCAAAACGACACCTTCTGACCACTGGTTGGAGTGTTTTTGTTAGCACAAAACGACTCTTTGCTGGGGATTCTGTGCTCTTTATTAGAGATGAAAAGTCACAGCTTCTCTTAGGCATAAGGCGTGCTAACAGGCAGCAGCCAGCTCTCTCTTCGTCGGTCATATCAAGTGATAGCATGCACATAGGAATTCTTGCTTCTGCTGCTCATGCTGCTGCAAATAACAGTCCTTTTACCATATTTTACAACCCTAGGGCCAGTCCTTCTGAATTTGTGATACCTTTGGCCAAGTATAATAAAGCAATGTATACACAAGTTTCGCTTGGCATGCGATTTAGGATGATGTTTGAAACTGAGGAGTCGGGAGTACGCAGATATATGGGTACGATTACTGGTATCAGCGACATGGATTCTGTGCGATGGAAAAATTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAGCAGCTGGTGAACGACCTAACCGAGTTTCAATATGGGAAGTTGAGCCTGTTGTGACTCCCTTTTACATATGTCCGCCTCCATTTTTCAGACCCAAATTCCCTAAACAACCAGGGATGCCAGATGATGAATCTGATATTGAAAATGCTTTTAAGAGAGCCATGCCATGGTTTGGTGATGACTTTGGCATGAAAGATGCACCAAGCTCAATCTTTCCTGGTTTAAGTTTAGTGCAGTGGATGAGCATGCAACATAATAATCAGTTCCCAGCAGCTCAATCTGGAATTTTGCCGTCCATGGTTGCTCCTAGTGCTCTGAATGATGACCCATCCAAATTATTGAGTTTTCAAGCACCAGTACTGTCTTCACCAAATCTCCAATTCAGCAAAGCAAATCAACTGAACCAAGTTGGCCAGTTGCCTCCAACTGCATGGTCTCAACAGCAGCAGCTTCAGCAATTATTACAAGTTCCTGCAAGCCAACAGTTACAGCAGCAGCAGTTGCCACCCCAGCAGGAACTACAGCAGCAACAACTGCAGCAGCTGCCCCAGCAGCAGCAACTCCAGTCACAACAGCCACAACGGCAACAGCAGACCTCGCAATCTGTTCTTCTGAACAACAGTGTAACCGCTGCTAACCATTTGCCAAATCCAAGTTTGCAACAACCACTTGTATACTCTCAGCTACAACAACAACAATTGCTTGCAGGCAATATTCAATCACATCAAACCAGCCAACCATCTAATAAGAATTCATTTCAGACATCTTTATCGGAAGAAACACAGTTTCAGCCACAAATAGAGCAGCAACCTAGCCTTCTTCTGAGACACCAGCAGCCAACACAATTTCAACAGGCCCCACTACAATTATTGCAACAAAGTCTGTCTCAAAGAGCACAACAGCAGCCACAAGTTCAGCAATTTTCACAGCCAATCCCAACTGAGCAACAACTTCAATTGCAGCTGCTACAGAAGCTGCAGCAGCAGCAGCAACCATTGCTCTCCCCAGCTAGCCCACTATTACCACCTCAGCTGCTACAGCAGCAGCACGTTCATCAGCAAAACCAGCAGTTACCACCATTGCCGTTGCCCAATCAGCAGCAGTTCAATACTAGTGGAGGCAGCTTCCAAACAGAAAAACTTAACAGCAATGGCTTCGCAAGTTTAGGTCTCATGCAGTCCCAGCAGGCTCCTGTAACCCAATCCCATAATCAATTCAAACCAACCACGGCAATTAGAGCATACTCTGGACTGACCGATGGAGATGCTCCGTCTTGTTCAACCTCACCTTCCACTAATAATTGCCCCATTTCAGTATCAAACCTGCTCAATAAGAACCAGCAAGGAGCAGCCACACTTGGTGGAGATTCAGTAGTTGAGCCTGCAACTAACCCGACACAGGAGCTACAGAGCAAACCTGATTTGCGGATCAAACATGAGTTTCCTAACTCAAAAGGATTAGACCAACTAAAATATAAAAGTACTGTTCCTGACCAGTTAGAAGCGTCTTCTTCTGGGACATCATATTGTTTGGATGCTGGCACTATTCAGCAGACTCTCCCACTCCCTACATGTTTGGATAATGATGTACAATCACATCCACGTAACAATATCCCTTTCAGTAATAGCATGGATGGATTGACACCAGATACCTTATTGTCGAGGGGATATGACTCTCAAAAAGATCTTCAGAACTTACTTTCTAACTATGGTGGGGGTGTGCCAAGAGATATTGAAACAGAGTTGTCCACTGCTGCAATCAGCTCACAGTCATTTGGGGTTCCGAACCTGCCTTTCAAGCCTGGCTGCTCAAATGATGTCAACGTAAATGAAGCTGGAGCTTTGAGTGGTGGATTGTGGGCAAACCACAGTCAACGTATGCGTACATATACAAAGGTTCAAAAGCGTGGATCAGTGGGTAGATGTATCGATGTCACTCGCTACAAAGGATATGACGAGCTTAGGCATGATCTTGCCCGCATGTTTGGCATTGAAGGGCAGTTAGAAGATCCTCAACGAACTGATTGGAAACTTGTTTATGTAGACCATGAAAATGATATACTTCTAGTTGGTGATGATCCTTGGGAGGAGTTTGTGAGCTGTGTTCAGAGCATAAAAATCCTGTCATCCGCTGAAGTACAGCAGATGAGTTTGGATGGGAATTTGGGTCACATTCAGGCTCCAAATCAAGCTTGCAGTGGGACGGATAGTGGAAATGCATGGAGAGGGCAGTATGATGACAACTCGGCTGCATCATTCAATCGATAAGGTTTATGGAGTCCAATGTATAACGGACCATGTCTCCTGCCGTCTGGGTTGCTGTTCTTAATTAAAATTTGTTGGAACATTCCAAAAAGGTCAAACAGCTCCTGAGTTGAGGGCGGCAGGAAATAGCAACTCAGCAAAATGTCCAATACTGTGAATACGGATATTGACTTGCCATCCAATCGCTATTTCTTGTAGGAGATGGAGCTTTTTCGTGGATGCATAGTAGACGGCCTAAAGCATATCATGAAGTTGATTTAGTTTAAAGCTATATTTCTTACTTCTCCAAGCACATATATGGTTGCTACCTGATTAAATCAAATCCTAGTTGCATTGGTGAAGTCAAGCATGCAAGTGAAGACAGCTTGACCGACGACATTCTTGTAAATTGTAACACTTAACTTGTTTATATTCCAAAGTATGTAGCAGCTGGAGTAACAATCCTCAGTAGATATGATGATGAGCTTCAATTTTAAGCTGCACCTTAATTGTGGTCCAACATTGTAATCAGAGTGGTGGTTTAGAGAGAAGGTAAGGTAATGCTGGAAATTGCAATTTCCATCACTGCAACAATAGTTAGGATGATTGTACATTTTTTCTTCTCGTGATTGTATCAAAAACTCAAACGAAGAGTTGCATCTAGTCAATATACAATTTTTGGTTAGGCTCAA 3811 43.64 MQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVTPFYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWFGDDFGMKDAPSSIFPGLSLVQWMSMQHNNQFPAAQSGILPSMVAPSALNDDPSKLLSFQAPVLSSPNLQFSKANQLNQVGQLPPTAWSQQQQLQQLLQVPASQQLQQQQLPPQQELQQQQLQQLPQQQQLQSQQPQRQQQTSQSVLLNNSVTAANHLPNPSLQQPLVYSQLQQQQLLAGNIQSHQTSQPSNKNSFQTSLSEETQFQPQIEQQPSLLLRHQQPTQFQQAPLQLLQQSLSQRAQQQPQVQQFSQPIPTEQQLQLQLLQKLQQQQQPLLSPASPLLPPQLLQQQHVHQQNQQLPPLPLPNQQQFNTSGGSFQTEKLNSNGFASLGLMQSQQAPVTQSHNQFKPTTAIRAYSGLTDGDAPSCSTSPSTNNCPISVSNLLNKNQQGAATLGGDSVVEPATNPTQELQSKPDLRIKHEFPNSKGLDQLKYKSTVPDQLEASSSGTSYCLDAGTIQQTLPLPTCLDNDVQSHPRNNIPFSNSMDGLTPDTLLSRGYDSQKDLQNLLSNYGGGVPRDIETELSTAAISSQSFGVPNLPFKPGCSNDVNVNEAGALSGGLWANHSQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGNLGHIQAPNQACSGTDSGNAWRGQYDDNSAASFNR 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 45940121 45948800 + XM_039034960.1 Bhi06g01558 37897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01558 936 Gene3D - 804 898 - -
Bhi06g01558 936 ProSiteProfiles PB1 domain profile. 809 902 IPR000270 GO:0005515
Bhi06g01558 936 Gene3D - 131 202 - -
Bhi06g01558 936 SUPERFAMILY DNA-binding pseudobarrel domain 2 97 IPR015300 -
Bhi06g01558 936 PANTHER AUXIN RESPONSE FACTOR 19 1 924 - -
Bhi06g01558 936 CDD B3_DNA 6 68 IPR003340 GO:0003677
Bhi06g01558 936 MobiDBLite consensus disorder prediction 633 652 - -
Bhi06g01558 936 MobiDBLite consensus disorder prediction 633 654 - -
Bhi06g01558 936 ProSiteProfiles B3 DNA-binding domain profile. 1 70 IPR003340 GO:0003677
Bhi06g01558 936 Gene3D - 1 69 IPR015300 -
Bhi06g01558 936 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 924 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi06g01558 936 MobiDBLite consensus disorder prediction 420 448 - -
Bhi06g01558 936 Pfam Auxin response factor 94 176 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi06g01558 936 Pfam B3 DNA binding domain 6 69 IPR003340 GO:0003677
Bhi06g01558 936 SUPERFAMILY CAD & PB1 domains 822 887 - -
Bhi06g01558 936 SMART B3_2 1 70 IPR003340 GO:0003677
Bhi06g01558 936 MobiDBLite consensus disorder prediction 917 936 - -
Bhi06g01558 936 MobiDBLite consensus disorder prediction 528 562 - -
Bhi06g01558 936 Pfam AUX/IAA family 806 895 IPR033389 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01558 Bhi-Chr6:45940121 Bhi03g00112 Bhi-Chr3:2995513 8.22E-29 dispersed
Bhi06g01557 Bhi-Chr6:45933087 Bhi06g01558 Bhi-Chr6:45940121 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1406 PF02309 AUX_IAA 2.10E-09 CL0072 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01558 K14486 - egt:105968029 862.448