Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01560 GAGGTGTATGGTTGGTGGGTGCACCCAAATGTGGCTGAAAATTTCAGGACAACTGTGGATCACTCCTATTGTTAGAATGTGGTGCAATTATGGAGAAGGATGCATTTTGGAATGCCAAGAATGAGACGAAAAAAAAGGTTGGCCCAACAGAGTCGCAGACAACCACACAATTCTTCGAACAGCGGCTGGTTTGTATCCAGAGGTATTTTCCATTTTCCCTTTTGGCTCTGCAATGGCCGCTGTTGGAATTGTGTTCTTGATCGTCCTTGTAGGGGTTGGTCTACCCGTGTGTTGTCCTTTGTCCGAGAACGAGGCTCTGCTGAAGCTGAAGCAATCCTTCACCCATTCTGAATCCTTGAATTCGTGGAACCCAGACTCAGTGCCCTGCTCGGCTCGATGGACTGGCATCATCTGTAACAGGGGCGTCATCACAGGCCTACATCTCTCCGGCCTCCAACTGTCGGGCAAGATCGACGTGGAAGCTCTCCTCCAGCTTCGGAGCCTTCGAACCATTAGCTTCGTGAACAACAAATTCTCAGGCCCCATTCCGGAATTCAACAAAATCGGGGTTCTCAAGGCCCTCCTCCTCACTGGGAACCACTTCTCCGGGGCTATCCCAAACGATTTCTTTTCGTCCCTGACCTCCCTAAAAAAGGTGTGGCTCTCCTCCAACAACTTCTCCGGAAACATTCCACACTCCCTGTCACAACTCTCCCATTTGATCGAACTCCACCTGGAGAGCAACCAATTCTCGGGGCCTATCCCACAGCTCAAATACGCCTCCATCATAACCTCCCTCGATCTCTCCAACAACAAGCTCGAGGGCCAAATACCCGACACTCTCTCCAAATTCGACGCAAAGGCATTCGCTGGAAACGAAGGCCTCTGCGGGAACCCACTCCCCAAATCTTGCGGCGAGAATGCAGCGCGGATTTCTGAAGAGAAGCCACCTTCTCCTCCTGGGGAATCCCAGGGCAACATTTCCAAGTTGGTAGTGGCATCCTTGATAGCCGTGGCTGTATTTCTCATGGTCTTCTTATTCCTTAGCGCGTCCAAGCGTAGAGATGATGAGTTCAGCGTGCTGGGGAGGGAACAGATGGAGGAGGTGGTGGAGGTGCACGTCCCCAGTTCTGGCCACGACAAGCAGTCCAGTAGAAGAGGAGGCGGGGACTCCAAGAGAGGCTCACAACAGGGGAAGGCCGGGATGAGCGATCTCGTGGTGGTCAATGAAGACAAGGGTACATTTGGGTTGGCGGATTTGATGAAGGCTGCGGCGGAGGTTCTAGGGAATGGTGGCTTGGGTTCCGCCTACAAGGCAGTCATGTCCAATGGGCTATCAGTGGTGGTAAAGAGAATGCGAGAGATGAACAAGCTAGGGAAGGATGGGTTCGATGCGGAGATGAGGCGCCTCGGAAGACTGAGCCATCGGAACATACTAACGCCTTTGGCCTATCATTACAGGAGAGAGGAGAAACTACTGGTGTCAGAGTACATTCCAAAGGGCAGTCTTTTGTATGTGTTGCATGGTGACCGTGGAGCCTGCCATGCGGACCTTAACTGGGCCACCCGGTTAAGGATCGTGCAGGGGATCGCAAGGGGACTGGGGTTCCTCCATTCGGAATTCGCAACCTATGATCTGCCGCATGGGAATCTCAAATCCAGCAACGTTCTTCTAAGCGACAACTATGAACCACTTCTGAGCGACTACGCGTTCCATCCCCTTATCAATCCCAACAATGCGATCCAGGCAATGTTCGCCTATAGATCTCCCGAGTATGCCCAGAGCCAGGAAGTCTCTCCCAAGTCTGATGTTTATTGTCTTGGCATTATCATTCTCGAAATCATGACCAGCAAATTTCCTTCTCAATATCTTACCAATGGCAAGGGTGGCACCGATGTGGTGCAGTGGGTCTCCTCCGCCGTTTCTGAGAAGAGGGAGGCTGAACTCATCGACCCTGAGATTGCAAACGACGCCGATGCACTCGATCGCATGGTCAACCTCCTCACAATCGGCGCGGATTGCACCCACAACAATCCTCAGCAACGGCCCGAAATGAGGGAAGCCATTAGGAGAATAGAAGAGATATGAGTCAGATACAGGAATATTCATTAATTTTAAGCTGCAAATACCTCTTCTTTTTTTTTCTTCTCCTCTTTTTTTTTTCAAGTCCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2217 50.25 MAAVGIVFLIVLVGVGLPVCCPLSENEALLKLKQSFTHSESLNSWNPDSVPCSARWTGIICNRGVITGLHLSGLQLSGKIDVEALLQLRSLRTISFVNNKFSGPIPEFNKIGVLKALLLTGNHFSGAIPNDFFSSLTSLKKVWLSSNNFSGNIPHSLSQLSHLIELHLESNQFSGPIPQLKYASIITSLDLSNNKLEGQIPDTLSKFDAKAFAGNEGLCGNPLPKSCGENAARISEEKPPSPPGESQGNISKLVVASLIAVAVFLMVFLFLSASKRRDDEFSVLGREQMEEVVEVHVPSSGHDKQSSRRGGGDSKRGSQQGKAGMSDLVVVNEDKGTFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREMNKLGKDGFDAEMRRLGRLSHRNILTPLAYHYRREEKLLVSEYIPKGSLLYVLHGDRGACHADLNWATRLRIVQGIARGLGFLHSEFATYDLPHGNLKSSNVLLSDNYEPLLSDYAFHPLINPNNAIQAMFAYRSPEYAQSQEVSPKSDVYCLGIIILEIMTSKFPSQYLTNGKGGTDVVQWVSSAVSEKREAELIDPEIANDADALDRMVNLLTIGADCTHNNPQQRPEMREAIRRIEEI 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 45986735 45989033 + XM_039033294.1 Bhi06g01560 37899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01560 618 CDD STKc_IRAK 351 618 - -
Bhi06g01560 618 SUPERFAMILY L domain-like 20 207 - -
Bhi06g01560 618 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Bhi06g01560 618 Gene3D Ribonuclease Inhibitor 183 227 IPR032675 -
Bhi06g01560 618 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 618 - -
Bhi06g01560 618 Gene3D Phosphorylase Kinase; domain 1 313 420 - -
Bhi06g01560 618 SUPERFAMILY Protein kinase-like (PK-like) 349 614 IPR011009 -
Bhi06g01560 618 MobiDBLite consensus disorder prediction 293 311 - -
Bhi06g01560 618 Gene3D Transferase(Phosphotransferase) domain 1 421 618 - -
Bhi06g01560 618 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 618 - -
Bhi06g01560 618 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01560 618 MobiDBLite consensus disorder prediction 293 325 - -
Bhi06g01560 618 ProSiteProfiles Protein kinase domain profile. 345 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01560 618 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Bhi06g01560 618 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01560 Bhi-Chr6:45986735 Bhi08g02222 Bhi-Chr8:63281115 3.90E-144 dispersed
Bhi06g01560 Bhi-Chr6:45986735 Bhi09g02387 Bhi-Chr9:65113013 4.66E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87835 PF00069 Pkinase 5.80E-27 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01560 - - cmo:103498999 1104.35