Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01606 TTTTATTTGATTTATTTTTTATTTTTGTTCCCTCTCCTTTTAAAGAGAAAGAAAGAGCCCAATCTTCAAAAGCTCGGACTGTAAGAAAACACTTGTTCTGCTACTGAAATTTTTTGTGCGTTTGATTTTCATTTCTCTGTGCCTTTCTTCTCCATAGCTTAAAAAGTGGTCTCCGGATCCTAGCAAACATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGAGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCGCCGATGTCGAAGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTCTATGGGTTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAACTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCTGTTCATAGTGATGCCTGGCTTCTTGCTGTGGCATTCTATTTTGGTGCTAGGTTTGGCTTTGATAAATCTGACAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATCAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAGAGGGGGATTGGCGAAAGATGAGGACGAGGGACTGGATGAAGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCGTCGGACGAGTTCTGGATATGTTGTGACATCTGCGAGAAGTGGTTTCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGATAATGATGGGTACCTAGTTAATTTATTCATGGAGGATTAAACTAACTTGTAGTCAGTTCAATGTTAATCCACGTTCCCACAGGGTATGTACTAAATGCGTTGGCTGGAACCTTGTTTATTCGGATAATTTATAGGCTATTAAAATGTATTCTATGTAATTCCGAACTAGGAAACATGGATTGCTCTCTATGTGCGAACCTGTCGTCAGTGGAGTGTGAAACATTCTTATTTATCTTGTTTAATTCGTTAATTGGTTCTGATCTTCTTCTTGCCCTGGGCTTCAGAACATAAACATCGTTCTCATTTCCAAGGTATGTTAACTTTACTTTGGTTTTCTTCTGGTTACTGGGTGAAATGAGGTTGCTCATTTCCGTCTTCCACCCTTCACTCTAATGTGCCAATTGTTAAGATCCAAGTGTGTTTGGATGAGGATTTGACGATGCTTTCTGGCAATCTGATAATTGTCCAAGGCAAAATTGACAGGTGAAAAAAGCATTGTTGGATGCTGTGGAATCATGCTCTGCGCAAAGATGTTTGAGATTCTGGTTTGTTAGTCTTCAGTAATCATATCTGTTGTGGATGGAGCTGGTGTGCTATGCATTCATGGCAGAAGTACGAGATATGAGAATGGCAATGCCTAATTCCTCGGTGGTTGATGCAGCAGCACATGAAACCAGGTAGTAAGTTAAGCAACTTGGCATTTGATTGATGGGGGAACTGGTAGCTGAGAAATGCGTTAAATACATCATATCTGTTGAAAAGGCGGTTTTATGCACGGAGAAACAGTGACTTTCATATTGTGATTATGGAACATCTTACTGTCTTAGAATGGATGGTGCACACTGGGGGTTAACAGCACTGGATATTCTTGGAAAGTTAAATACGGTGGATGTTGATTAGGCTGTTTCATGGGTCTTGAAAGGCTAGCACGATTCAGGTAATGCGGACACAAGTTGAATGAAATTTCCTCTCTGCATGCTTGCAGATTAGATGTGAACATTGGCTCATCTATAACAAAAGAAGCGAACGAACGCCTGATATATGTCGGTGGTTTCGCTGACAACATTGGATATGATTCACACTTATCAGTTAGGTTCGTATCACTTTTCTTCTTGGTGGTTTAACAAATGTGGGTGAAAATCAAAACTTTCTAACTTTGAGAAAGGTATATGTGGTTGAATTATGCATAAGGTGGCTCGTTGAACTGTGTCATACTATATATGAATGTAAAAGCATGGGCGGTTTTATTTTAGAAAAA 2172 41.62 MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTADVEEFYQLCDPEKENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSSVSNNSSNKSKMGPRGGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46454071 46458896 + XM_039034844.1 Bhi06g01606 37945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01606 241 SMART PHD_3 187 235 IPR001965 -
Bhi06g01606 241 SUPERFAMILY FYVE/PHD zinc finger 177 238 IPR011011 -
Bhi06g01606 241 ProSitePatterns Zinc finger PHD-type signature. 188 234 IPR019786 -
Bhi06g01606 241 ProSiteProfiles Zinc finger PHD-type profile. 185 237 IPR019787 -
Bhi06g01606 241 MobiDBLite consensus disorder prediction 145 179 - -
Bhi06g01606 241 CDD PHD_AL_plant 187 237 IPR044104 -
Bhi06g01606 241 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Bhi06g01606 241 Pfam PHD-finger 188 237 IPR019787 -
Bhi06g01606 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 236 IPR013083 -
Bhi06g01606 241 PANTHER CPG BINDING PROTEIN 3 241 IPR045104 GO:0006355|GO:0042393
Bhi06g01606 241 MobiDBLite consensus disorder prediction 145 161 - -
Bhi06g01606 241 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 3 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01606 Bhi-Chr6:46454071 Bhi06g01610 Bhi-Chr6:46454071 1.19E-180 dispersed
Bhi09g00348 Bhi-Chr9:7201780 Bhi06g01606 Bhi-Chr6:46454071 5.21E-117 dispersed
Bhi09g00349 Bhi-Chr9:7201781 Bhi06g01606 Bhi-Chr6:46454071 5.21E-117 dispersed
Bhi06g01606 Bhi-Chr6:46454071 Bhi06g01609 Bhi-Chr6:46454071 1.19E-180 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1413 PF12165 Alfin 1.70E-69 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01606 - - jre:109008877 431.409