Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi06g01606 | TTTTATTTGATTTATTTTTTATTTTTGTTCCCTCTCCTTTTAAAGAGAAAGAAAGAGCCCAATCTTCAAAAGCTCGGACTGTAAGAAAACACTTGTTCTGCTACTGAAATTTTTTGTGCGTTTGATTTTCATTTCTCTGTGCCTTTCTTCTCCATAGCTTAAAAAGTGGTCTCCGGATCCTAGCAAACATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGAGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCGCCGATGTCGAAGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTCTATGGGTTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAACTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCTGTTCATAGTGATGCCTGGCTTCTTGCTGTGGCATTCTATTTTGGTGCTAGGTTTGGCTTTGATAAATCTGACAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATCAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAGAGGGGGATTGGCGAAAGATGAGGACGAGGGACTGGATGAAGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCGTCGGACGAGTTCTGGATATGTTGTGACATCTGCGAGAAGTGGTTTCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGATAATGATGGGTACCTAGTTAATTTATTCATGGAGGATTAAACTAACTTGTAGTCAGTTCAATGTTAATCCACGTTCCCACAGGGTATGTACTAAATGCGTTGGCTGGAACCTTGTTTATTCGGATAATTTATAGGCTATTAAAATGTATTCTATGTAATTCCGAACTAGGAAACATGGATTGCTCTCTATGTGCGAACCTGTCGTCAGTGGAGTGTGAAACATTCTTATTTATCTTGTTTAATTCGTTAATTGGTTCTGATCTTCTTCTTGCCCTGGGCTTCAGAACATAAACATCGTTCTCATTTCCAAGGTATGTTAACTTTACTTTGGTTTTCTTCTGGTTACTGGGTGAAATGAGGTTGCTCATTTCCGTCTTCCACCCTTCACTCTAATGTGCCAATTGTTAAGATCCAAGTGTGTTTGGATGAGGATTTGACGATGCTTTCTGGCAATCTGATAATTGTCCAAGGCAAAATTGACAGGTGAAAAAAGCATTGTTGGATGCTGTGGAATCATGCTCTGCGCAAAGATGTTTGAGATTCTGGTTTGTTAGTCTTCAGTAATCATATCTGTTGTGGATGGAGCTGGTGTGCTATGCATTCATGGCAGAAGTACGAGATATGAGAATGGCAATGCCTAATTCCTCGGTGGTTGATGCAGCAGCACATGAAACCAGGTAGTAAGTTAAGCAACTTGGCATTTGATTGATGGGGGAACTGGTAGCTGAGAAATGCGTTAAATACATCATATCTGTTGAAAAGGCGGTTTTATGCACGGAGAAACAGTGACTTTCATATTGTGATTATGGAACATCTTACTGTCTTAGAATGGATGGTGCACACTGGGGGTTAACAGCACTGGATATTCTTGGAAAGTTAAATACGGTGGATGTTGATTAGGCTGTTTCATGGGTCTTGAAAGGCTAGCACGATTCAGGTAATGCGGACACAAGTTGAATGAAATTTCCTCTCTGCATGCTTGCAGATTAGATGTGAACATTGGCTCATCTATAACAAAAGAAGCGAACGAACGCCTGATATATGTCGGTGGTTTCGCTGACAACATTGGATATGATTCACACTTATCAGTTAGGTTCGTATCACTTTTCTTCTTGGTGGTTTAACAAATGTGGGTGAAAATCAAAACTTTCTAACTTTGAGAAAGGTATATGTGGTTGAATTATGCATAAGGTGGCTCGTTGAACTGTGTCATACTATATATGAATGTAAAAGCATGGGCGGTTTTATTTTAGAAAAA | 2172 | 41.62 | MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTADVEEFYQLCDPEKENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSSVSNNSSNKSKMGPRGGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 46454071 | 46458896 | + | XM_039034844.1 | Bhi06g01606 | 37945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi06g01606 | 241 | SMART | PHD_3 | 187 | 235 | IPR001965 | - | |
Bhi06g01606 | 241 | SUPERFAMILY | FYVE/PHD zinc finger | 177 | 238 | IPR011011 | - | |
Bhi06g01606 | 241 | ProSitePatterns | Zinc finger PHD-type signature. | 188 | 234 | IPR019786 | - | |
Bhi06g01606 | 241 | ProSiteProfiles | Zinc finger PHD-type profile. | 185 | 237 | IPR019787 | - | |
Bhi06g01606 | 241 | MobiDBLite | consensus disorder prediction | 145 | 179 | - | - | |
Bhi06g01606 | 241 | CDD | PHD_AL_plant | 187 | 237 | IPR044104 | - | |
Bhi06g01606 | 241 | Pfam | Alfin | 11 | 139 | IPR021998 | GO:0006355|GO:0042393 | |
Bhi06g01606 | 241 | Pfam | PHD-finger | 188 | 237 | IPR019787 | - | |
Bhi06g01606 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 178 | 236 | IPR013083 | - | |
Bhi06g01606 | 241 | PANTHER | CPG BINDING PROTEIN | 3 | 241 | IPR045104 | GO:0006355|GO:0042393 | |
Bhi06g01606 | 241 | MobiDBLite | consensus disorder prediction | 145 | 161 | - | - | |
Bhi06g01606 | 241 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 | 3 | 241 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi06g01606 | Bhi-Chr6:46454071 | Bhi06g01610 | Bhi-Chr6:46454071 | 1.19E-180 | dispersed | |
Bhi09g00348 | Bhi-Chr9:7201780 | Bhi06g01606 | Bhi-Chr6:46454071 | 5.21E-117 | dispersed | |
Bhi09g00349 | Bhi-Chr9:7201781 | Bhi06g01606 | Bhi-Chr6:46454071 | 5.21E-117 | dispersed | |
Bhi06g01606 | Bhi-Chr6:46454071 | Bhi06g01609 | Bhi-Chr6:46454071 | 1.19E-180 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1413 | PF12165 | Alfin | 1.70E-69 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi06g01606 | - | - | jre:109008877 | 431.409 |