Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi06g01607 | TTTTATTTGATTTATTTTTTATTTTTGTTCCCTCTCCTTTTAAAGAGAAAGAAAGAGCCCAATCTTCAAAAGCTCGGACTGTAAGAAAACACTTGTTCTGCTACTGAAATTTTTTGTGCGTTTGATTTTCATTTCTCTGTGCCTTTCTTCTCCATAGCTTAAAAAGTGGTCTCCGGATCCTAGCAAACATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGAGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCGCCGATGTCGAAGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTCTATGGGTTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAACTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCTGTTCATAGTGATGCCTGGCTTCTTGCTGTGGCATTCTATTTTGGTGCTAGGTTTGGCTTTGATAAATCTGACAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATCAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAGAGGGCGAGGTTCTGAATCAAGCAAATTGTCTAAGGGATTGGCGAAAGATGAGGACGAGGGACTGGATGAAGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCGTCGGACGAGTTCTGGATATGTTGTGACATCTGCGAGAAGTGGTTTCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGATAATGATGGGTACCTAGTTAATTTATTCATGGAGGATTAAACTAACTTGTAGTCAGTTCAATGTTAATCCACGTTCCCACAGGGTATGTACTAAATGCGTTGGCTGGAACCTTGTTTATTCGGATAATTTATAGGCTATTAAAATGTATTCTATGTAATTCCGAACTAGGAAACATGGATTGCTCTCTATGTGCGAACCTGTCGTCAGTGGAGTGTGAAACATTCTTATTTATCTTGTTTAATTCGTTAATTGGTTCTGATCTTCTTCTTGCCCTGGGCTTCAGAACATAAACATCGTTCTCATTTCCAAGGTGAAAAAAGCATTGTTGGATGCTGTGGAATCATGCTCTGCGCAAAGATGTTTGAGATTCTGGTTTGTTAGTCTTCAGTAATCATATCTGTTGTGGATGGAGCTGGTGTGCTATGCATTCATGGCAGAAGTACGAGATATGAGAATGGCAATGCCTAATTCCTCGGTGGTTGATGCAGCAGCACATGAAACCAGGTAGTAAGTTAAGCAACTTGGCATTTGATTGATGGGGGAACTGGTAGCTGAGAAATGCGTTAAATACATCATATCTGTTGAAAAGGCGGTTTTATGCACGGAGAAACAGTGACTTTCATATTGTGATTATGGAACATCTTACTGTCTTAGAATGGATGGTGCACACTGGGGGTTAACAGCACTGGATATTCTTGGAAAGTTAAATACGGTGGATGTTGATTAGGCTGTTTCATGGGTCTTGAAAGGCTAGCACGATTCAGGTAATGCGGACACAAGTTGAATGAAATTTCCTCTCTGCATGCTTGCAGATTAGATGTGAACATTGGCTCATCTATAACAAAAGAAGCGAACGAACGCCTGATATATGTCGGTGGTTTCGCTGACAACATTGGATATGATTCACACTTATCAGTTAGGTTCGTATCACTTTTCTTCTTGGTGGTTTAACAAATGTGGGTGAAAATCAAAACTTTCTAACTTTGAGAAAGGTATATGTGGTTGAATTATGCATAAGGTGGCTCGTTGAACTGTGTCATACTATATATGAATGTAAAAGCATGGGCGGTTTTATTTTAGAAAAA | 2030 | 41.72 | MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTADVEEFYQLCDPEKENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSSVSNNSSNKSKMGPRGRGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP | 251 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 46454071 | 46458896 | + | XM_039034831.1 | Bhi06g01607 | 37946 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi06g01607 | 251 | MobiDBLite | consensus disorder prediction | 145 | 164 | - | - | |
Bhi06g01607 | 251 | ProSitePatterns | Zinc finger PHD-type signature. | 198 | 244 | IPR019786 | - | |
Bhi06g01607 | 251 | MobiDBLite | consensus disorder prediction | 145 | 191 | - | - | |
Bhi06g01607 | 251 | SMART | PHD_3 | 197 | 245 | IPR001965 | - | |
Bhi06g01607 | 251 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 | 3 | 251 | - | - | |
Bhi06g01607 | 251 | Pfam | Alfin | 11 | 139 | IPR021998 | GO:0006355|GO:0042393 | |
Bhi06g01607 | 251 | ProSiteProfiles | Zinc finger PHD-type profile. | 195 | 247 | IPR019787 | - | |
Bhi06g01607 | 251 | CDD | PHD_AL_plant | 197 | 247 | IPR044104 | - | |
Bhi06g01607 | 251 | PANTHER | CPG BINDING PROTEIN | 3 | 251 | IPR045104 | GO:0006355|GO:0042393 | |
Bhi06g01607 | 251 | SUPERFAMILY | FYVE/PHD zinc finger | 187 | 248 | IPR011011 | - | |
Bhi06g01607 | 251 | Pfam | PHD-finger | 198 | 247 | IPR019787 | - | |
Bhi06g01607 | 251 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 188 | 246 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi06g01607 | Bhi-Chr6:46454071 | Bhi06g01610 | Bhi-Chr6:46454071 | 0 | dispersed | |
Bhi06g01607 | Bhi-Chr6:46454071 | Bhi06g01609 | Bhi-Chr6:46454071 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1414 | PF12165 | Alfin | 1.90E-69 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi06g01607 | - | - | rcu:8272513 | 456.832 |