Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01607 TTTTATTTGATTTATTTTTTATTTTTGTTCCCTCTCCTTTTAAAGAGAAAGAAAGAGCCCAATCTTCAAAAGCTCGGACTGTAAGAAAACACTTGTTCTGCTACTGAAATTTTTTGTGCGTTTGATTTTCATTTCTCTGTGCCTTTCTTCTCCATAGCTTAAAAAGTGGTCTCCGGATCCTAGCAAACATGGATGGGGGAGCAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGAGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCGCCGATGTCGAAGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTCTATGGGTTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCTGAGGAAGTACCTCCAGAACTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTATCCCTTGTTGCTGTTCATAGTGATGCCTGGCTTCTTGCTGTGGCATTCTATTTTGGTGCTAGGTTTGGCTTTGATAAATCTGACAGGAAACGCCTTTTTACAATGATAAATGATCTACCCACAATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATCAGTTTCAAATAACAGCAGCAACAAATCCAAGATGGGCCCAAGAGGGCGAGGTTCTGAATCAAGCAAATTGTCTAAGGGATTGGCGAAAGATGAGGACGAGGGACTGGATGAAGAAGATGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCGTCGGACGAGTTCTGGATATGTTGTGACATCTGCGAGAAGTGGTTTCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGAGCACGGCCCTGATAATGATGGGTACCTAGTTAATTTATTCATGGAGGATTAAACTAACTTGTAGTCAGTTCAATGTTAATCCACGTTCCCACAGGGTATGTACTAAATGCGTTGGCTGGAACCTTGTTTATTCGGATAATTTATAGGCTATTAAAATGTATTCTATGTAATTCCGAACTAGGAAACATGGATTGCTCTCTATGTGCGAACCTGTCGTCAGTGGAGTGTGAAACATTCTTATTTATCTTGTTTAATTCGTTAATTGGTTCTGATCTTCTTCTTGCCCTGGGCTTCAGAACATAAACATCGTTCTCATTTCCAAGGTGAAAAAAGCATTGTTGGATGCTGTGGAATCATGCTCTGCGCAAAGATGTTTGAGATTCTGGTTTGTTAGTCTTCAGTAATCATATCTGTTGTGGATGGAGCTGGTGTGCTATGCATTCATGGCAGAAGTACGAGATATGAGAATGGCAATGCCTAATTCCTCGGTGGTTGATGCAGCAGCACATGAAACCAGGTAGTAAGTTAAGCAACTTGGCATTTGATTGATGGGGGAACTGGTAGCTGAGAAATGCGTTAAATACATCATATCTGTTGAAAAGGCGGTTTTATGCACGGAGAAACAGTGACTTTCATATTGTGATTATGGAACATCTTACTGTCTTAGAATGGATGGTGCACACTGGGGGTTAACAGCACTGGATATTCTTGGAAAGTTAAATACGGTGGATGTTGATTAGGCTGTTTCATGGGTCTTGAAAGGCTAGCACGATTCAGGTAATGCGGACACAAGTTGAATGAAATTTCCTCTCTGCATGCTTGCAGATTAGATGTGAACATTGGCTCATCTATAACAAAAGAAGCGAACGAACGCCTGATATATGTCGGTGGTTTCGCTGACAACATTGGATATGATTCACACTTATCAGTTAGGTTCGTATCACTTTTCTTCTTGGTGGTTTAACAAATGTGGGTGAAAATCAAAACTTTCTAACTTTGAGAAAGGTATATGTGGTTGAATTATGCATAAGGTGGCTCGTTGAACTGTGTCATACTATATATGAATGTAAAAGCATGGGCGGTTTTATTTTAGAAAAA 2030 41.72 MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTADVEEFYQLCDPEKENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSSVSNNSSNKSKMGPRGRGSESSKLSKGLAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46454071 46458896 + XM_039034831.1 Bhi06g01607 37946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01607 251 MobiDBLite consensus disorder prediction 145 164 - -
Bhi06g01607 251 ProSitePatterns Zinc finger PHD-type signature. 198 244 IPR019786 -
Bhi06g01607 251 MobiDBLite consensus disorder prediction 145 191 - -
Bhi06g01607 251 SMART PHD_3 197 245 IPR001965 -
Bhi06g01607 251 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 3 251 - -
Bhi06g01607 251 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Bhi06g01607 251 ProSiteProfiles Zinc finger PHD-type profile. 195 247 IPR019787 -
Bhi06g01607 251 CDD PHD_AL_plant 197 247 IPR044104 -
Bhi06g01607 251 PANTHER CPG BINDING PROTEIN 3 251 IPR045104 GO:0006355|GO:0042393
Bhi06g01607 251 SUPERFAMILY FYVE/PHD zinc finger 187 248 IPR011011 -
Bhi06g01607 251 Pfam PHD-finger 198 247 IPR019787 -
Bhi06g01607 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 246 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01607 Bhi-Chr6:46454071 Bhi06g01610 Bhi-Chr6:46454071 0 dispersed
Bhi06g01607 Bhi-Chr6:46454071 Bhi06g01609 Bhi-Chr6:46454071 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1414 PF12165 Alfin 1.90E-69 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01607 - - rcu:8272513 456.832