Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01630 CGACCACGCAATCGAATTATACAAATTAAAATGGAAATTTAATTTGAAAAAAAAAATGAATTGGACTGACTCTCGTTGATGGTGGTGTTTCTAAGGCAATGATATCCGTGGCGGTTGCCGTTAACGGCGTCCGTGGCGGCAAAGGCGGTGGAGGAAGCCGCCGCGCTGTGAGATGGGCCGTCGAGAATCTCTTGCCGACCGCCGATCGCTTCATATTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCTTGTGGCTGTCTCAGAACTTGATGCAGACGTGGTAGCTCTTTATGTTCATGATGTGAAACAGAAATATGAACAAGTTTTTGTCCCTTTTAAAAAGTTATGTAGAAGAGAAAAGTTTCTTCTACTGGTAGAAACTTTGGTTTTGGAGGATGATAATCCTGCCACTGCACTTTTGAGATATGCATCTGAATCTGGGATTAAACGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCGTAGCAAGGAAGCTAAAAGGGGATTCAGTACCCTCTGCTATTATGAGAACTGTTCATAGTTCTTTTGATATTCATGTTATATATAAGAGGAGAGTTATCACACGAAAGGCTAGTACTGCTCCGTCCAATGAAACTGACTCGAGGCAGTGGATGCTCGGTGACACAGATTACTACAGGGGTTCCAGTGCTGCTAGTGAAAAATCATTGGGAACTTTCTCTTCTTCTTCCTTGTCGATTGGACATCGAAGGGGTGATAGCCTCAAAGTTAACTCTACCGAGGAACTGAACTCTTTGAATACTCTGACTGAGGAGGAAGATATGCAGGCCGAAGTTGAATCTTTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAAACAAGCTTGTGAAGAACTAGTTCATGCTCAGAAGAAGGTTCAGTCACTTACATCAGAATGCCTTGAAGAATCAAGAAGAGTAAATGCTGCTTTGGAAAGGGAACAAGCTTTGAGGAAAACTGTTGCTAAAGAGAAAGAAAAACACTTGGAAGCCATTAAAGAGCTTGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAAAGGCAGCTGGCTGAGCTTAATGCCTTAAAGGAGTCCGTGGAGAAGCAGAAAATTGTTGATACTCTTCTGACTAATGATAGGAGATATAGAAGATATACTACTGCCGAAATTGAAGCTGCGACAAATTTCTTCGATGAAGTTAATGTGATTGGCGAGGGAGGATATGGGAAAGTCTACAATTGCAGTCTCGATCATACCCCTGTAGCGATTAAGGTTTTTCAACACGACATATTCAAGAAAAAAGACGAGTTTCTGAAAGAGGTTGAAATTCTTAGCCAGATACGTCACCCACACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGCTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGACCATATCTTGCTCCGGAATGGAAAAGCTCCCCTCCCTTGGTCTACTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGACTTGCATTTTTACACAATTCAAAGCCAGAGCCTATTATTCATAGAGATCTCAAACCGGGTAATATCTTACTGGACAGAAACTTTGTAAGCAAAATCTCAGATGTTGGAATGGCTAAGATCATCGGCGATATCGTGCCTGACAATGTCACAGAGTACCGAAACACTATCCTCGCCGGTACTCTACACTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCAAAGTCGGATACATATGCACTTGGAGTAACAATTCTGCAGTTGTTGACTGGACGACAGCCACATGGTCTTCTTCTTGCTATCGAAAATTCGATTGCAAGTGCCTCCCTTGCAGATATTCTGGACAAATCAATTAGTGACTGGCCTCTAGCTAAAGCTGAAGAGCTAGCTCGACTCGCGTTGAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCTGAAGTTCTTCCAGTCCTTAAAAGGCTTGTTGATTTTGCAGATACTTGTGAAAATGAAGACAAAGGTTTTGCTAATCCCCTAAGCCACTACTTCTGCCCAATCCTCCAGGAAATCATGGAGGATCCTTATATAGCAGCTGATGGCTTTACTTACGAGTATGTAGCCATTAAAGCATGGCTCGAGAAATACGACATATCGCCGGTGACAAAGCTTAAGCTCCAGCATTCTCTTTTTATTCCAAACCACACTTTGCGTTCTGCCATACAAGAGTGGAGGTCAAGAGTGACAGTTTCATCTTCCTAAGTTGGAAAATTTGTTTGTAATTGTCTCAAGCATTCTTATGGGGGTTTTTCCTTTTTCCATTTTTTAGAAAGAGAACATCTTTGTTAATATCTGTATAGTTAACAGAAAAATTTCAGGAAAGTTTGGTATTATTTTGTGCCGTGAACTACTTTCAGTATTCCAAGTTTATAAAGAGTAAATAATATACTTCATGGTGATGGGAGGGAGGCTCTTTCCTTCCTTTTT 2513 41.9 MISVAVAVNGVRGGKGGGGSRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDVKQKYEQVFVPFKKLCRREKFLLLVETLVLEDDNPATALLRYASESGIKRLVLGSCFRTCVARKLKGDSVPSAIMRTVHSSFDIHVIYKRRVITRKASTAPSNETDSRQWMLGDTDYYRGSSAASEKSLGTFSSSSLSIGHRRGDSLKVNSTEELNSLNTLTEEEDMQAEVESLQLELETTVSLYKQACEELVHAQKKVQSLTSECLEESRRVNAALEREQALRKTVAKEKEKHLEAIKELEEAKDLLAKEAYERQLAELNALKESVEKQKIVDTLLTNDRRYRRYTTAEIEAATNFFDEVNVIGEGGYGKVYNCSLDHTPVAIKVFQHDIFKKKDEFLKEVEILSQIRHPHVVLLLGACPERGCLIYEYMENGSLDDHILLRNGKAPLPWSTRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGRQPHGLLLAIENSIASASLADILDKSISDWPLAKAEELARLALKCLKLRCRDRPDLESEVLPVLKRLVDFADTCENEDKGFANPLSHYFCPILQEIMEDPYIAADGFTYEYVAIKAWLEKYDISPVTKLKLQHSLFIPNHTLRSAIQEWRSRVTVSSS 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46703319 46706922 - XM_039035195.1 Bhi06g01630 37969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01630 729 CDD STK_N 3 163 - -
Bhi06g01630 729 Gene3D Phosphorylase Kinase; domain 1 351 444 - -
Bhi06g01630 729 SUPERFAMILY Protein kinase-like (PK-like) 355 628 IPR011009 -
Bhi06g01630 729 Pfam Protein kinase domain 373 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01630 729 PANTHER OS02G0152300 PROTEIN 225 723 - -
Bhi06g01630 729 PANTHER OS02G0152300 PROTEIN 2 206 - -
Bhi06g01630 729 ProSitePatterns Protein kinases ATP-binding region signature. 378 399 IPR017441 GO:0005524
Bhi06g01630 729 SUPERFAMILY RING/U-box 646 723 - -
Bhi06g01630 729 Coils Coil 259 279 - -
Bhi06g01630 729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 657 727 IPR013083 -
Bhi06g01630 729 ProSiteProfiles Protein kinase domain profile. 372 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01630 729 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 225 723 - -
Bhi06g01630 729 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 2 206 - -
Bhi06g01630 729 SMART serkin_6 372 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01630 729 Pfam Universal stress protein family 19 139 IPR006016 -
Bhi06g01630 729 ProSiteProfiles U-box domain profile. 654 727 IPR003613 GO:0004842|GO:0016567
Bhi06g01630 729 SMART Ubox_2 658 720 IPR003613 GO:0004842|GO:0016567
Bhi06g01630 729 Pfam U-box domain 659 721 IPR003613 GO:0004842|GO:0016567
Bhi06g01630 729 CDD RING-Ubox_WDSUB1_like 659 699 - -
Bhi06g01630 729 Coils Coil 287 344 - -
Bhi06g01630 729 Gene3D HUPs 4 158 IPR014729 -
Bhi06g01630 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Bhi06g01630 729 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 142 - -
Bhi06g01630 729 Gene3D Transferase(Phosphotransferase) domain 1 445 653 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01630 Bhi-Chr6:46703319 Bhi09g00361 Bhi-Chr9:7565456 3.85E-140 dispersed
Bhi06g01630 Bhi-Chr6:46703319 Bhi09g02386 Bhi-Chr9:65099691 1.51E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87838 PF00069 Pkinase 1.60E-41 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01630 - - cpep:111805862 1230.7