Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01678 ATTGGGGGAAGAATTTAGAATCGATTCTGAATTGAGAAAATTTTGGGTTTGTTCGGATAAAAAGCTTCTTCCTCATTGACTATTCAGTTTCCATATAATTCGCATTCTGTGGATGATTCCATTTCATCCCACCTTTCTCTCCGATCGGCTCATACTTCACAGATTCTCTCACTCTCCCATCTCTCTAAATTCAATCCTTTCCTTATCATCTGTTGTTCTGTTTCAGTTTCTTTCGCTTTCCAATCCATACCCCTTTTCCTTCTCCCTCTTTGACTCTCATTTTTTGCTGAAATTGCGCTTTGATTTGCCCCCAATTGCCTGGAATTTGGATTTTCTGATCTGGGGTTTCGATTTTTTCATCTGGGTATTGGATTTTGCTTCTGGGATTTGTGGGATGAAGATCGTGGAATTGGAAGATGCTGGAAATGACCGGGAAACTGAAATCGGTAGTGGTCAGATTGTGAAAGTCGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCCTGTTTTACCCTACCCTTTTGTATAACGTGCTTCGGAACAAAATGGAAGCTGAATTCAGATGGTGGGATGAAGTTGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTGCCGAGATTGAAGAAGCTTGGTGTTGGTGGTGTTATCACTCTCAATGAACCTTATGAAACACTAGTTCCATCTTCCTTGTATTATCGCCATGGAATCGACCACTTAAAGATCCCAACGAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATCAGTCGAGCTGTTGACTTTATTCACAGAAATGCATCATCTGGTAAAACAACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACAACTATTGTGCTTTGCTATTTGGTCAGACATAAGCACATGACCCCATCTACTGCACTGGAATACGTGCGCTCTAGAAGACCACGTGTATTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCACGGACCCGTTACGAGTTCTAGCTCACCCTCAGGAGGAGATGCAGTCCTCATTACAAAAGACGATTTAGAAGGATATCATGGAACATGTATCGATAGTGCGGGTAGAGAACTTGCAGTAGTCCCTAGAATGGGTAAGTCAAAGCCCATGATAGCAAGGTTGTCATGCCTCTTTTCCTCTTTGATAGTTCATGGCAGTACTGGATCTCTCATTAAGCGTCTGCCCGCACCGGAGGCTCGTGCTTGTTGATGATGACCATGGCAACCTCCTCTTGTATAGATGTGTCAAGGAAGTAAGAATCAAACTCTTGATTAGAGTGGAGAAGTGAATGGAAAAGGCTCGAACAACGTCGTTTGCCTGAAGCTCGTAGAACACTAAACAGTGATTAGGTTGTACATAACTGGTACATCAAAATTTTCCCTTCCCTTGAATAATCTTCTCAAGAAAACAGAGAAAACCTCATGGTTTGTGCTGATGGAAAATATTAAGGTTGTTGGCTACAGAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTACGACCTTACTTGAACGAGATCTATTCTATAGGTTGTAACCATGTCGTGTCTTCTATAGGTTGTAACCATGTCGTGTCTTCTATGGTTCCTTGTAGCAGCAGCAAAAACAAGTTCTATGTAAACTCATGATAGCTTATGCCACATGTTGAATATTTGAAACGGCAAACCCAAACCTCAATGGAGAAAGTAACTTTATTTAAA 1742 41.62 MIPFHPTFLSDRLILHRFSHSPISLNSILSLSSVVLFQFLSLSNPYPFSFSLFDSHFLLKLRFDLPPIAWNLDFLIWGFDFFIWVLDFASGICGMKIVELEDAGNDRETEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVRHKHMTPSTALEYVRSRRPRVLLAPSQWEAVQEYSNHGPVTSSSSPSGGDAVLITKDDLEGYHGTCIDSAGRELAVVPRMGKSKPMIARLSCLFSSLIVHGSTGSLIKRLPAPEARAC 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47659137 47662036 - XM_039035061.1 Bhi06g01678 38017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01678 378 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 146 295 IPR029021 -
Bhi06g01678 378 SMART dsp_5 156 297 IPR020422 GO:0006470|GO:0008138
Bhi06g01678 378 CDD PTPMT1 153 297 IPR044596 GO:0004721
Bhi06g01678 378 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 300 IPR020422 GO:0006470|GO:0008138
Bhi06g01678 378 Pfam Dual specificity phosphatase, catalytic domain 193 296 IPR000340 GO:0008138|GO:0016311
Bhi06g01678 378 Gene3D Protein tyrosine phosphatase superfamily 153 298 IPR029021 -
Bhi06g01678 378 PANTHER OS01G0739200 PROTEIN 95 378 - -
Bhi06g01678 378 PANTHER - 95 378 - -
Bhi06g01678 378 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311|GO:0016791
Bhi06g01678 378 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 221 289 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01714 Bhi-Chr4:41791672 Bhi06g01678 Bhi-Chr6:47659137 3.31E-06 dispersed
Bhi06g01678 Bhi-Chr6:47659137 Bhi11g00051 Bhi-Chr11:1003592 9.47E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01678 - - bhj:120080407 715.301