Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01721 ACTCTCTTAATTTCCTCTGACATAATTACTTAAATTAAAAAAAAAAAGGCAATCGAGGAAATGCGAAAGCCCTATCTTTCTAGATTGTTCATCGTTTCCAGATTTTTGGTTCTCTTCTCAGATCGCTCTCAAGTTTCGTCGGCTTCCTAGTGCAGTAGAGAATGATGAAGTTGCAAACATATGCGGGGATTAGTTTTATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGGCAGTTCTACCCAGCATTGGTCTATTTATCGACTTCCAAGATAAATTTAGTGCTTCTTCTCAATATGGGTTTAGTGATCATGTGCATCTTGTGGCAGCTAACAAAAAAAATATTTCTGGGTTCTCTTAGAGAAGCAGAAGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGACTTTTCTGTTGCATTCCTGGGTATGGTTACGGCTTTGTTGTTGATCAAAGCTCTGCATTGGCTGGCTCAGAAGAGAGTTGAATACATGGAAACCACTCCATCGGTGCCTTTGTTGTCCCATATCCGGATTGTTTCTTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCAACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAGGAAACCCGTCTATACATTTTACTTGGAACTTATACGAGACTTACTTCATTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGTGTGCCTTTGCACTTGATCCGGGAGCTTTATGAGATCTTTAGGAATTTTAGGATTCGCATTGCAGATTACATCCGTTACAGAAAGATTACTTCAAATATGAATGATCGTTTTCCAGATGCAACGCCCGAGGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGCGGACATCTTTTTCATGTCCACTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCTCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGCGGTCATCATGGAGTGCAGTCTGATGCTAACCAACAAGGAACAGGAACCACAAGTTCATCTGCACAAGGTACAAGTGGTACGGGCGTTACTAATGATAATTTGAGTCATCATCAGGCTAGAGTCCGTGCTGCTGCCGCTGCTGCTTCAATATATGAGAAATCATATGTTTATCCTTGTCCGAGCACATTAGTATGGTCTCTTGGATATGCAGTAGTTCCTCAGGTTGAAAGACCTTTGCCTGACTCCGACAATACAGAAACAAATGGAGAACAAACTCCCAATGGACATCCACAATACTTCTCATTTCCTAGCGGCCCTTCAAACCTGTCCTTCACTCAATTTCCCCAAAATCTCTTTGTTCCTTTTCAGCCACGAGAGGGCACTGGAAACAATACAGATGAATTGGGCAGTAGTCTAAATGTATCAGGCTCACAGCTTGAAGCTCAAGAAAAATTTCTTCAACAGATTGAGATCCTTCAGAATCAACTGCAACTTCTCCGTAGACCAAAAGTTGAGGAAAGTTCAAGAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTTTAGCAACCTCATCATCACCGTTGCCGTCATCATCTTCATTAGATTCTCATCCATCCGGAGAAACCGAAAGAGCGGCAATATAGAACAAATGTGCATAATTATATTGTGTAATAATACAAGACTGCAGATTCACACAATGACATAGATGTGTCTATTGTATACGGAAGATGTACTTGGTAAATTTTTAGAAGCAGTCTTCTTTCCCTTTGCCATATTGGTTGGTTCGCTGTAAATGCTGAATTTGATCTCTTTTGAAGCAGAATATGAGGCGGTCAAAAAAGAATATTGAAAGTTTTTTGTTTTT 2053 40.57 MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHGVQSDANQQGTGTTSSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCPSTLVWSLGYAVVPQVERPLPDSDNTETNGEQTPNGHPQYFSFPSGPSNLSFTQFPQNLFVPFQPREGTGNNTDELGSSLNVSGSQLEAQEKFLQQIEILQNQLQLLRRPKVEESSRAGEADKKGKSLATSSSPLPSSSSLDSHPSGETERAAI 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 48514899 48528109 - XM_039033948.1 Bhi06g01721 38060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01721 556 PANTHER RING ZINC FINGER PROTEIN 1 457 - -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 340 375 - -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 343 375 - -
Bhi06g01721 556 SUPERFAMILY RING/U-box 272 336 - -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 421 441 - -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 528 548 - -
Bhi06g01721 556 SMART ring_2 292 329 IPR001841 -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 510 556 - -
Bhi06g01721 556 Pfam Ring finger domain 291 330 IPR001841 -
Bhi06g01721 556 PANTHER - 1 457 - -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 423 441 - -
Bhi06g01721 556 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 336 IPR013083 -
Bhi06g01721 556 CDD RING-H2_synoviolin 289 330 - -
Bhi06g01721 556 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Bhi06g01721 556 MobiDBLite consensus disorder prediction 512 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00649 Bhi-Chr5:18862331 Bhi06g01721 Bhi-Chr6:48514899 1.23E-25 dispersed
Bhi06g01721 Bhi-Chr6:48514899 Bhi07g00436 Bhi-Chr7:19367817 1.40E-11 dispersed
Bhi06g01721 Bhi-Chr6:48514899 Bhi06g01722 Bhi-Chr6:48514899 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01721 K10601 - csv:101215351 996.497