Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01809 GTTTTAATTCAGAAGAGAGCGGAAGAAGAAGAAAACCCAAAGAGAAGAAACAGAGAGAAAAAAAAAAAAAAGCAAAAAAAAGAAAGACAATCGCCATTCGAAAATTGTAGGGTTTCAGAACTCTGCAGGGAATGCGGAGAGATGAAATTTGCTTCGTTGATTCAGTTTGAGTTGATCGGAAGATCCAAAACCTTCATCATCGGCGGCAGAAATTGCCACCGGAAACACGTCGAAGACGGGTGATCTATCTCCTCTCTCTTTCAACTCTTTTAACCTCGTTTTAACTCACTCTCTACGAAGAAACAACACAGAAATCAATTAATCTCGATTCAATCGAGTTCAAACCCGGCGGCGGATATGGCGGATAAAGGCAGAGACGGCGGTCATTCGAGTTTACTCGACGGGAAGTACGAATTAGGCCGTCTTCTAGGGCATGGAACCTTCGCCAAGGTTTACCATGCTCGGAATCTGCGAACGGGGAAGAGCGTCGCGATGAAAGTGGTTGGGAAGGAAAAGATCATCAAAGTCGGCATGACGGAGCAGATCAAGAGAGAAATCTCTGTGATGAAAATGGTGAAGCATCCGAATATTGTGGAGCTTCACGAGGTGATGGCGAGTAAATCGAAGATCTATTTCGCGATGGAGTTTGTTAGAGGCGGTGAACTGTTCTCCAAAATCGCGAAAGGTCGGTTGCGAGAAGATGTAGCTAGGGTTTATTTTCAGCAATTAATCTCTGCAATCGATTTCTGCCACAGCCGTGGAGTTTACCACCGTGATCTGAAACCGGAAAATCTCCTCCTCGACGAAGACGGTAACCTTAAGGTCACCGATTTTGGCCTCACCGCTTTCTCGGAGCACTTGAAGCAAGACGGATTGTTACATACGACATGCGGAACTCCTGCGTACGTCGCGCCGGAGGTCATCGGAAAGCAAGGATACGACGGCGCGAAGGCTGATCTATGGTCTTGCGGAGTCATCCTTTTCGTTCTTCTCGCCGGATACCTTCCATTCCAGGACGACAACATAGTGGCGATGTACAAGAAGATTTACAGAGGCGACTTCAAGTGTCCGCCGTGGTTCTCTCCCGAAGCCCGTAGGCTAATCACGAAGCTTCTAGATCCTAATCCGGTGTCCAGAATCGGTATCGGGAAGATTACATCGTCGTCGTGGTTCAAGAAATCGGTACCGAAGACACTGATTAGAAAGGAGGAGCAAGAACAAACAGAGGAGAATTTGACGAAATCAAAGCCACCGGCGGAAACATTGAACGCGTTCCACATAATATCTTTATCGGAAGGGTTTGATTTGTCGCCGTTGTTTGAGGAGAAGAAGAGGGAGGAGAAAGAGGAGATGAGATTCGCGACTTCATCGCCGGCGAGCAGTGTGATATCGAAGCTTGAGGAAGTGGCGAAGGCGGTGAAGTTCGATGTGAAGAAGAGTGAATCGTGGGTTCGGTTGCAGGGGCAAGAGAAGGGGAGAAAAGGGAAGCTGACTATTGCGGCGGATATCTTTGCAATGACGCCGTCGTTTGTGGTGGTGGAGGTGAAGAAGGATAACGGAGATACTTTGGAGTATAACCAGTTCTGCCGGAAGGAGCTCCGGCCGGCATTGAAGGACATTGTTTGGACTTCCCCGACGGGGAACTCAACACCAGCTTGAAGAATTTGTGATGAATGATCAGATTTACGAGATTGTGATTTGGAGTTGGAGAATGTTTGAGTTTTCTTTTTATCAAATGATAATTGCGTATGATTAGTTTGTTTTTTATGATGATTGTCATAAATCGATTGTTTTATTTCATGATGTGGGTTTCTGTT 1817 46.45 MADKGRDGGHSSLLDGKYELGRLLGHGTFAKVYHARNLRTGKSVAMKVVGKEKIIKVGMTEQIKREISVMKMVKHPNIVELHEVMASKSKIYFAMEFVRGGELFSKIAKGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLTAFSEHLKQDGLLHTTCGTPAYVAPEVIGKQGYDGAKADLWSCGVILFVLLAGYLPFQDDNIVAMYKKIYRGDFKCPPWFSPEARRLITKLLDPNPVSRIGIGKITSSSWFKKSVPKTLIRKEEQEQTEENLTKSKPPAETLNAFHIISLSEGFDLSPLFEEKKREEKEEMRFATSSPASSVISKLEEVAKAVKFDVKKSESWVRLQGQEKGRKGKLTIAADIFAMTPSFVVVEVKKDNGDTLEYNQFCRKELRPALKDIVWTSPTGNSTPA 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50648534 50650350 - XM_039034222.1 Bhi06g01809 38148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01809 433 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 430 - -
Bhi06g01809 433 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01809 433 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01809 433 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi06g01809 433 Gene3D Phosphorylase Kinase; domain 1 13 97 - -
Bhi06g01809 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Bhi06g01809 433 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Bhi06g01809 433 CDD STKc_SnRK3 17 271 - -
Bhi06g01809 433 PANTHER - 10 430 - -
Bhi06g01809 433 Gene3D Kinase associated domain 1, KA1 299 424 - -
Bhi06g01809 433 SUPERFAMILY Protein kinase-like (PK-like) 15 293 IPR011009 -
Bhi06g01809 433 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Bhi06g01809 433 CDD CIPK_C 304 419 - -
Bhi06g01809 433 Gene3D Transferase(Phosphotransferase) domain 1 98 298 - -
Bhi06g01809 433 Pfam NAF domain 301 360 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00271 Bhi-Chr3:5787930 Bhi06g01809 Bhi-Chr6:50648534 0 dispersed
Bhi06g01809 Bhi-Chr6:50648534 Bhi08g02183 Bhi-Chr8:62148419 0 dispersed
Bhi10g00874 Bhi-Chr10:17770878 Bhi06g01809 Bhi-Chr6:50648534 9.97E-158 dispersed
Bhi06g01809 Bhi-Chr6:50648534 Bhi02g00886 Bhi-Chr2:18862122 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87851 PF00069 Pkinase 4.50E-72 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01809 - K07198 csv:101208458 822.387