Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01822 TTTATTTTCCAAAACACACGCTCTCTCTTTCTCTCTCTTTCTCTCTCTCATCTCAAAAATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAAAGTCCAACCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCTCCGACGCCGGTCCCCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTTGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGTACGCCGGAGGAAGCTTTAGCGGCTAAGAAAGCTGCCACGGCGTCGTCTCACTCTTCGTCCTCCAAGGCCAAGAAGGAACTCGCTTCTTCTTCTTCTCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCTAAGAAATCTCAGTTGGCTACACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCGATCTCCAATGCATCTCTCCGTCAGCCAGCGGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCATTATGCGGTTCTTATGTACGGACTGACCTCGGAGGAAAGACCGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCATATCATAGGAGGGGGAGTTGGTGGGCCGTTGAAGGCTGCTGGACCTGTGCAGGTTATTGTTGGAACCTTTGTAATCGACCCGAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCATCTGCTGGCAAGTTGCCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGTTATGGCTCCAACATTGACTCGGGAGGTAATCAAATCAGGGGAAATGATGAACACCAAGGTCTTGGGGAGAGTCATTTTTTACTTCAGCCTCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGGACGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAATGGAGATTACGATCAGATTCCCGATTGAGAGCTAACATTCAAGACGGAACGGGACTGCAAAGTTTGTCGTAGATAAATGTACAATATCAACAGTTGCAATGCCAGTAATCTTCCCTTCACTCGTTAGCTAATTCTGGTTGTAGTATGCACCATACTGTAAAGGTGATAACAAACTCTTTAGAAGTTTTTATGCCCTTCTTGCATTTTTATTTTCCCCCCTTCCCTAAGTTTTTACCCATCCATCCACCTTTCATGGTGTTTGCATGTTAAGTCTCTGTCTAATTCTAATTCTCATATTTTCCCCTTAGATGGACCAGTTTGCTGTAGTTGTTACAGTTTGCAATTTCCAATTCGATCATATAAACAAAAACCTCTCTGGTGATTTAGAA 1505 47.64 MEPNENQLSSYFHHHQHHHQSPTTTSPTNGLLPPTHHLSSAAASDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLATLGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLPSPIGGTSMSNLRYGSNIDSGGNQIRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLTGRTGHHSPENGDYDQIPD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51082587 51089305 + XM_039034501.1 Bhi06g01822 38161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01822 361 Gene3D - 143 262 - -
Bhi06g01822 361 MobiDBLite consensus disorder prediction 1 105 - -
Bhi06g01822 361 MobiDBLite consensus disorder prediction 339 361 - -
Bhi06g01822 361 MobiDBLite consensus disorder prediction 21 35 - -
Bhi06g01822 361 MobiDBLite consensus disorder prediction 261 283 - -
Bhi06g01822 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 352 - -
Bhi06g01822 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 254 - -
Bhi06g01822 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 254 IPR005175 -
Bhi06g01822 361 ProSiteProfiles PPC domain profile profile. 137 277 IPR005175 -
Bhi06g01822 361 CDD DUF296 143 253 IPR005175 -
Bhi06g01822 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 352 IPR039605 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01822 Bhi-Chr6:51082587 Bhi04g01204 Bhi-Chr4:29285074 1.99E-53 dispersed
Bhi06g01822 Bhi-Chr6:51082587 Bhi01g01245 Bhi-Chr1:25459542 7.31E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01822 - - csv:101221844 592.038