Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01828 AAAAAACCTTCTCTCTCTCTCTCTCTCTCTCTCTCCTCACATACTTTCTTGTCCATCTCAACTCTAGGCATCTCTTTGCCTTTTCTTTCCTCTCCTTCCCCTCATCATCATTTCAACCTCTCTCTCTCTCTCACTGATACTTTCCCTTTGCTTAATCCTTCCCTTTACATCTCCCAGTACTACTTATTAATTTAATCCTTTCTCATCTAATCATATTCATTTCTCTATTTTCCCCCTTTTTTCTAAATTATTATTACATCTTCTTCTTCCCCCTTTCAACCCCACAATACCCTCTTCTTCTTCAGCACAAAATTTGTTTTTAAACAAATTGTGACATTTTAAACCCTGAAAATTTCCAAGATCTGAAAATTATAAAAAGATTTTATTTTTGATGATGGCCAACCGGTGGTGGACTTCCGGCCAGATGGGTCTTCCGGGAGTTGATCATACCTCAACCAGCTCCTCTGCCATGAGAAAACCAGATCTCGGAATCTCCATGAACGACAACGGTGGACCTGTCCACAGCGGCGGGGATGACGATGATGATAGGGATAACGGTGGCGATGAACCTAAAGAAGGAGCTGTTGAAGTTCCAACACGCCGTCCCCGTGGCCGCCCGCCGGGCTCCAAGAATAAGCCTAAGCCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGATATCGCCGAAAGTGTTGCTCAATTCGCTCGACGACGACAGAGAGGTGTTTCTGTGCTTAGTGGCAGCGGTACGGTAACGAATGTCACACTCCGACAACCATCTGCCCCCGGTGCAGTCTTAACCCTCCATGGCCGGTTCGAGATTCTTTCTTTGACTGGAACTTTCCTCCCAGGACCAGCCCCGCCCGGCTCCACTGGACTAACGATCTACTTGGCCGGTGGACAAGGGCAAGTGGTGGGCGGCAGCGTCGTCGGGCCACTCACCGCTGCCGGCCCAGTGATGGTGATTGCTGCAACATTTTCCAACGCGACATATGAAAGATTACCCTTGGAAGAGGAGGAAGAAGGCGGCGGAGTAGGAGCACAAGGGCACACATCGGCAGGCGGTGGCGCAGTCGACGGTTCTCCTCAAGGCATCGGAAGCGGAGTCGGAGATCCGTCAGCTATGCCTCCACTGTATAATTTACCGCCGAACTTGCTACCGAATGGCGGCGGTGGGCAGATGAACCAGGAGGCTTATTCTTGGGCTCACGGCGGCCGGCCCTCGTTCTAAAGCTTCTGATGATAAAAAGGTTAGAAATTAAAGTGTCCTAAGATTCAGGCTGTTTGTTGCAGCCATGGTTTAGGAGGTTGAAGATATAAAAGATGAAAGAGATTTGTTCTCTATATATTTCATGTCTTAGTCGATTATAAATATTCAGTGTGAAAAAACCCTTAAATTGTTCTATGCAAATACAA 1455 47.29 MMANRWWTSGQMGLPGVDHTSTSSSAMRKPDLGISMNDNGGPVHSGGDDDDDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAQFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGVGAQGHTSAGGGAVDGSPQGIGSGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPSF 292
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 51245070 51246705 - XM_039034873.1 Bhi06g01828 38167
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01828 292 PIRSF ESCAROLA 11 292 IPR014476 GO:0003680
Bhi06g01828 292 MobiDBLite consensus disorder prediction 220 275 - -
Bhi06g01828 292 MobiDBLite consensus disorder prediction 1 94 - -
Bhi06g01828 292 MobiDBLite consensus disorder prediction 14 30 - -
Bhi06g01828 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Bhi06g01828 292 ProSiteProfiles PPC domain profile profile. 94 232 IPR005175 -
Bhi06g01828 292 Gene3D - 98 224 - -
Bhi06g01828 292 MobiDBLite consensus disorder prediction 44 69 - -
Bhi06g01828 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 291 - -
Bhi06g01828 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 222 - -
Bhi06g01828 292 CDD DUF296 98 181 IPR005175 -
Bhi06g01828 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 291 IPR014476 GO:0003680
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01828 Bhi-Chr6:51245070 Bhi12g01646 Bhi-Chr12:53155832 1.98E-81 dispersed
Bhi06g01828 Bhi-Chr6:51245070 Bhi01g00104 Bhi-Chr1:2168956 2.71E-81 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01828 - - csv:101220902 500.745