Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi06g01828 | AAAAAACCTTCTCTCTCTCTCTCTCTCTCTCTCTCCTCACATACTTTCTTGTCCATCTCAACTCTAGGCATCTCTTTGCCTTTTCTTTCCTCTCCTTCCCCTCATCATCATTTCAACCTCTCTCTCTCTCTCACTGATACTTTCCCTTTGCTTAATCCTTCCCTTTACATCTCCCAGTACTACTTATTAATTTAATCCTTTCTCATCTAATCATATTCATTTCTCTATTTTCCCCCTTTTTTCTAAATTATTATTACATCTTCTTCTTCCCCCTTTCAACCCCACAATACCCTCTTCTTCTTCAGCACAAAATTTGTTTTTAAACAAATTGTGACATTTTAAACCCTGAAAATTTCCAAGATCTGAAAATTATAAAAAGATTTTATTTTTGATGATGGCCAACCGGTGGTGGACTTCCGGCCAGATGGGTCTTCCGGGAGTTGATCATACCTCAACCAGCTCCTCTGCCATGAGAAAACCAGATCTCGGAATCTCCATGAACGACAACGGTGGACCTGTCCACAGCGGCGGGGATGACGATGATGATAGGGATAACGGTGGCGATGAACCTAAAGAAGGAGCTGTTGAAGTTCCAACACGCCGTCCCCGTGGCCGCCCGCCGGGCTCCAAGAATAAGCCTAAGCCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGATATCGCCGAAAGTGTTGCTCAATTCGCTCGACGACGACAGAGAGGTGTTTCTGTGCTTAGTGGCAGCGGTACGGTAACGAATGTCACACTCCGACAACCATCTGCCCCCGGTGCAGTCTTAACCCTCCATGGCCGGTTCGAGATTCTTTCTTTGACTGGAACTTTCCTCCCAGGACCAGCCCCGCCCGGCTCCACTGGACTAACGATCTACTTGGCCGGTGGACAAGGGCAAGTGGTGGGCGGCAGCGTCGTCGGGCCACTCACCGCTGCCGGCCCAGTGATGGTGATTGCTGCAACATTTTCCAACGCGACATATGAAAGATTACCCTTGGAAGAGGAGGAAGAAGGCGGCGGAGTAGGAGCACAAGGGCACACATCGGCAGGCGGTGGCGCAGTCGACGGTTCTCCTCAAGGCATCGGAAGCGGAGTCGGAGATCCGTCAGCTATGCCTCCACTGTATAATTTACCGCCGAACTTGCTACCGAATGGCGGCGGTGGGCAGATGAACCAGGAGGCTTATTCTTGGGCTCACGGCGGCCGGCCCTCGTTCTAAAGCTTCTGATGATAAAAAGGTTAGAAATTAAAGTGTCCTAAGATTCAGGCTGTTTGTTGCAGCCATGGTTTAGGAGGTTGAAGATATAAAAGATGAAAGAGATTTGTTCTCTATATATTTCATGTCTTAGTCGATTATAAATATTCAGTGTGAAAAAACCCTTAAATTGTTCTATGCAAATACAA | 1455 | 47.29 | MMANRWWTSGQMGLPGVDHTSTSSSAMRKPDLGISMNDNGGPVHSGGDDDDDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAQFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGVGAQGHTSAGGGAVDGSPQGIGSGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPSF | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 51245070 | 51246705 | - | XM_039034873.1 | Bhi06g01828 | 38167 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi06g01828 | 292 | PIRSF | ESCAROLA | 11 | 292 | IPR014476 | GO:0003680 | |
| Bhi06g01828 | 292 | MobiDBLite | consensus disorder prediction | 220 | 275 | - | - | |
| Bhi06g01828 | 292 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
| Bhi06g01828 | 292 | MobiDBLite | consensus disorder prediction | 14 | 30 | - | - | |
| Bhi06g01828 | 292 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 211 | IPR005175 | - | |
| Bhi06g01828 | 292 | ProSiteProfiles | PPC domain profile profile. | 94 | 232 | IPR005175 | - | |
| Bhi06g01828 | 292 | Gene3D | - | 98 | 224 | - | - | |
| Bhi06g01828 | 292 | MobiDBLite | consensus disorder prediction | 44 | 69 | - | - | |
| Bhi06g01828 | 292 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 | 8 | 291 | - | - | |
| Bhi06g01828 | 292 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 95 | 222 | - | - | |
| Bhi06g01828 | 292 | CDD | DUF296 | 98 | 181 | IPR005175 | - | |
| Bhi06g01828 | 292 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 8 | 291 | IPR014476 | GO:0003680 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi06g01828 | Bhi-Chr6:51245070 | Bhi12g01646 | Bhi-Chr12:53155832 | 1.98E-81 | dispersed | |
| Bhi06g01828 | Bhi-Chr6:51245070 | Bhi01g00104 | Bhi-Chr1:2168956 | 2.71E-81 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi06g01828 | - | - | csv:101220902 | 500.745 |