Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01889 TAGAACATTCTATCATCGTATTGTTTTCTTTTCTTCTCGAATGACAAAACAAGAGAATGGGGAAATTTGGGAGATTTTTGTTCATTACTCAGAAAAATTGTCAGTTTTCATCCTTTCTCCACTGAGATGAAGAAGACGAGAGATGGGGAAAAGGGTGCGTCACATTAATGCAATAGAATTGATACGATAAGCCTTTCTCCAATCAACCAATTGCGAACCCATTTCAATATAAGGTCACAATTCTGTGTCAGAAGAAGAAAACAAGACGCGTCTGAAGAAAAATTACAAAGAGGAAGGTTGTCGATGGCACTTTCCGATTCCACCAATGGCGATGAAGAATCCATTATCACTCCCTTGCTTGCTCAGAAATCATTTGCCAATTCTTCCTCACAGGTTGCTCTTGTTGGGGCTGATATCTGCCCCATTGAGAGCCTTGATTACGAGATTTTTGATAACGAGCTCTTCATGCAAGATTGGAGGAGTCGTGAGGATTTCCAGATATTTCAATACTTGGTTATGAAGTGGCTTTCATGCTTCTTGATCGGTTTGATTATGGGTCTTGTTGGATTTTTCAACAACCTTGCGGTGGAGAATATTGCAGGGAAGAAATTTGTGGTCACTTCGAATATGATGCTTGAGGGCAGGTATGGGATGGCTTTTCTTGTTTTCTCTGTTTCCAATTTAGTTCTCACCCTATTCGCATCTGTCATTACGGCATTGATCTGTCCCCAAGCAGCCGGCTCAGGTATACCAGAAGTAAAGGCTTATCTGAATGGCGTGGATGCACCTGGAATATTATCGCCCCGGACGCTGTTGGTGAAGATTGTTGGCAGCATTTCTATTGTGTCATCATCTATGATCGTTGGAAAAGCTGGGCCTATGGTACATACAGGGGCATGTGTTGCATCTTTGGTAGGTCAGGGGGGTTTCAAAATATTTGGCTTGACATGGAGATGGCGATACCATCTCAAGAATGATCGAGATAGGCGGGATCTTGTAACGTGTGGAGCCGCTGCTGGAATAGCTGCTGCTTTTCGTGCTCCTGTTGGTGGTGTGTTGTTTGCTTTTGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTCTGTGGCGATCGTTTTTCACTACGGCTATAGTTGCTGTGGTCTTACGCTCACTGATTGACATTTGTTTAAATGGATTATGTGGATTATTCGGTAAGGGGGGGCTCATAATATTTGATACCTACTCAGACTTTCCCACATATCACCTCGAAGACCTACCTCCTGTATTCATTCTGGCATTTATTGGAGGCATACTTGGAAGCTTATATAATTATCTTTTGAACAAATTTCTTCGGATTTATCATCTCATACACGAGAAAGGCGTTATTTACAAAATTTTACTGGCTTGCTCGGTCTCAATTTTCACATCCTTCCTTCTTTTTGGATTACCGTGGTTTGCATTGTGCCAACCTTGCCCATCAAGTGCTCAAGAAATTTGTCCTACGATAGGTCGATCTGGTAACTTCAAGAAGTTTCAGTGTGCTCCTGGTCACTACAATGATCTTGCAAGTCTCATATTTAACACCAATGATGATGCCATAAAAAATCTCTTTAGCAAGAACACGGACTCCGAGTTCCAGTTATTATCGATGCTCACATTTTTCATTACCTGTTTTTCCTTGAGCATTCTCAGTTATGGGACTGTCGCACCTGTTGGACTGTTTGTCCCTGTTATTGTAACTGGAGCTTCTTATGGTCGTTTTGTCGGAATGGTTGTTGGTCCATACACAAACCTCAGCCATGGCTTCTTTGCCATATTAGGTGCTGCCTCATTTCTCGGGGGGTCGATGAGGACAACGGTTTCTCTCTGTGTTATTATGCTTGAATTGACCAATAATTTGTTGTTGTTGCCTTTAATAATGTTGGTTCTCCTTATTTCCAAAACTGTAGCTGATGCTTTCAACAGTAATATATATAACTTGATCATGAAAGCGAAAGGATTTCCTTATCTAGAAGGCCATGTTGAGCCATACATGAGGCAGCTCACTGTCGCTGATGTGTTAACGAGTCCACTTCAATTATTTCATGGCATCGAGAAGGTTCGTAATATAGTAAACATTCTCAGAATGACGAGCCATCATGGATTTCCTGTCATTGACGAACCTCCTTTGTCCGAATTCCCTGTTTTATATGGTCTAATTCTCAGAGCCCATCTTATCATGTTGTTAAAGAAGAAAGCTTTCTTGTCGGTTCCAATACTAGGATCGGAAAGTGAAGATCCATGTAAGCTATTCTCAGCTGATGATTTTGTAAAGATGGGTTCGGGTGATGTTGAAAGGATTGAAGACATACAATTGACCGATGAAGAAATGGAGATGTTCATTGATCTACATCCGTTTGCAAATACTTCACCTTGTACTGTCTTGGAGACAATGTCAGTCGCGAAGGCTCTCGAGATTTTTCGAGAAACTGGTCTAAGACACATGCTGGTGATACCCAAGGTCCCTGGAAGATTGGCCGTGGTTGGTGTATTGACTCGGCACAACTTCATGCCAGATTACATTCTCAGTTTGCATCCATCGCTAGAGAAGAGCAGATGGAAAAGGTTGAGAATCAAATTTCACTGGAGAAAATTCTTCTAGTGCAGCAGTATCAGACATATTGAAAAG 2649 41.79 MALSDSTNGDEESIITPLLAQKSFANSSSQVALVGADICPIESLDYEIFDNELFMQDWRSREDFQIFQYLVMKWLSCFLIGLIMGLVGFFNNLAVENIAGKKFVVTSNMMLEGRYGMAFLVFSVSNLVLTLFASVITALICPQAAGSGIPEVKAYLNGVDAPGILSPRTLLVKIVGSISIVSSSMIVGKAGPMVHTGACVASLVGQGGFKIFGLTWRWRYHLKNDRDRRDLVTCGAAAGIAAAFRAPVGGVLFAFEEMASWWRSALLWRSFFTTAIVAVVLRSLIDICLNGLCGLFGKGGLIIFDTYSDFPTYHLEDLPPVFILAFIGGILGSLYNYLLNKFLRIYHLIHEKGVIYKILLACSVSIFTSFLLFGLPWFALCQPCPSSAQEICPTIGRSGNFKKFQCAPGHYNDLASLIFNTNDDAIKNLFSKNTDSEFQLLSMLTFFITCFSLSILSYGTVAPVGLFVPVIVTGASYGRFVGMVVGPYTNLSHGFFAILGAASFLGGSMRTTVSLCVIMLELTNNLLLLPLIMLVLLISKTVADAFNSNIYNLIMKAKGFPYLEGHVEPYMRQLTVADVLTSPLQLFHGIEKVRNIVNILRMTSHHGFPVIDEPPLSEFPVLYGLILRAHLIMLLKKKAFLSVPILGSESEDPCKLFSADDFVKMGSGDVERIEDIQLTDEEMEMFIDLHPFANTSPCTVLETMSVAKALEIFRETGLRHMLVIPKVPGRLAVVGVLTRHNFMPDYILSLHPSLEKSRWKRLRIKFHWRKFF 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 52860680 52866012 + XM_039034245.1 Bhi06g01889 38228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01889 772 PRINTS Plant CLC chloride channel signature 47 55 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01889 772 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01889 772 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01889 772 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01889 772 PRINTS Plant CLC chloride channel signature 414 430 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01889 772 Pfam CBS domain 695 740 IPR000644 -
Bhi06g01889 772 Gene3D - 564 744 IPR046342 -
Bhi06g01889 772 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 10 765 - -
Bhi06g01889 772 Pfam Voltage gated chloride channel 130 544 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PANTHER CHLORIDE CHANNEL PROTEIN 10 765 - -
Bhi06g01889 772 SUPERFAMILY CBS-domain pair 566 743 IPR046342 -
Bhi06g01889 772 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PRINTS Chloride channel signature 462 482 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PRINTS Chloride channel signature 494 510 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PRINTS Chloride channel signature 512 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 PRINTS Chloride channel signature 550 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01889 772 Gene3D Clc chloride channel 65 563 - -
Bhi06g01889 772 CDD CBS_pair_voltage-gated_CLC_euk_bac 575 745 - -
Bhi06g01889 772 ProSiteProfiles CBS domain profile. 693 753 IPR000644 -
Bhi06g01889 772 SUPERFAMILY Clc chloride channel 51 565 IPR014743 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01889 Bhi-Chr6:52860680 Bhi11g00798 Bhi-Chr11:21796059 0 dispersed
Bhi06g01889 Bhi-Chr6:52860680 Bhi06g01890 Bhi-Chr6:52860680 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01889 K05016 - csv:101216071 1394.41