Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01890 TAGAACATTCTATCATCGTATTGTTTTCTTTTCTTCTCGAATGACAAAACAAGAGAATGGGGAAATTTGGGAGATTTTTGTTCATTACTCAGAAAAATTGTCAGTTTTCATCCTTTCTCCACTGAGATGAAGAAGACGAGAGATGGGGAAAAGGGTGCGTCACATTAATGCAATAGAATTGATACGATAAGCCTTTCTCCAATCAACCAATTGCGAACCCATTTCAATATAAGGTCACAATTCTGTGTCAGAAGAAGAAAACAAGACGCGTCTGAAGAAAAATTACAAAGAGGAAGGTTGTCGATGGCACTTTCCGATTCCACCAATGGCGATGAAGAATCCATTATCACTCCCTTGCTTGCTCAGAAATCATTTGCCAATTCTTCCTCACAGGTTGCTCTTGTTGGGGCTGATATCTGCCCCATTGAGAGCCTTGATTACGAGTGAGATTTTTGATAACGAGCTCTTCATGCAAGATTGGAGGAGTCGTGAGGATTTCCAGATATTTCAATACTTGGTTATGAAGTGGCTTTCATGCTTCTTGATCGGTTTGATTATGGGTCTTGTTGGATTTTTCAACAACCTTGCGGTGGAGAATATTGCAGGGAAGAAATTTGTGGTCACTTCGAATATGATGCTTGAGGGCAGGTATGGGATGGCTTTTCTTGTTTTCTCTGTTTCCAATTTAGTTCTCACCCTATTCGCATCTGTCATTACGGCATTGATCTGTCCCCAAGCAGCCGGCTCAGGTATACCAGAAGTAAAGGCTTATCTGAATGGCGTGGATGCACCTGGAATATTATCGCCCCGGACGCTGTTGGTGAAGATTGTTGGCAGCATTTCTATTGTGTCATCATCTATGATCGTTGGAAAAGCTGGGCCTATGGTACATACAGGGGCATGTGTTGCATCTTTGGTAGGTCAGGGGGGTTTCAAAATATTTGGCTTGACATGGAGATGGCGATACCATCTCAAGAATGATCGAGATAGGCGGGATCTTGTAACGTGTGGAGCCGCTGCTGGAATAGCTGCTGCTTTTCGTGCTCCTGTTGGTGGTGTGTTGTTTGCTTTTGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTCTGTGGCGATCGTTTTTCACTACGGCTATAGTTGCTGTGGTCTTACGCTCACTGATTGACATTTGTTTAAATGGATTATGTGGATTATTCGGTAAGGGGGGGCTCATAATATTTGATACCTACTCAGACTTTCCCACATATCACCTCGAAGACCTACCTCCTGTATTCATTCTGGCATTTATTGGAGGCATACTTGGAAGCTTATATAATTATCTTTTGAACAAATTTCTTCGGATTTATCATCTCATACACGAGAAAGGCGTTATTTACAAAATTTTACTGGCTTGCTCGGTCTCAATTTTCACATCCTTCCTTCTTTTTGGATTACCGTGGTTTGCATTGTGCCAACCTTGCCCATCAAGTGCTCAAGAAATTTGTCCTACGATAGGTCGATCTGGTAACTTCAAGAAGTTTCAGTGTGCTCCTGGTCACTACAATGATCTTGCAAGTCTCATATTTAACACCAATGATGATGCCATAAAAAATCTCTTTAGCAAGAACACGGACTCCGAGTTCCAGTTATTATCGATGCTCACATTTTTCATTACCTGTTTTTCCTTGAGCATTCTCAGTTATGGGACTGTCGCACCTGTTGGACTGTTTGTCCCTGTTATTGTAACTGGAGCTTCTTATGGTCGTTTTGTCGGAATGGTTGTTGGTCCATACACAAACCTCAGCCATGGCTTCTTTGCCATATTAGGTGCTGCCTCATTTCTCGGGGGGTCGATGAGGACAACGGTTTCTCTCTGTGTTATTATGCTTGAATTGACCAATAATTTGTTGTTGTTGCCTTTAATAATGTTGGTTCTCCTTATTTCCAAAACTGTAGCTGATGCTTTCAACAGTAATATATATAACTTGATCATGAAAGCGAAAGGATTTCCTTATCTAGAAGGCCATGTTGAGCCATACATGAGGCAGCTCACTGTCGCTGATGTGTTAACGAGTCCACTTCAATTATTTCATGGCATCGAGAAGGTTCGTAATATAGTAAACATTCTCAGAATGACGAGCCATCATGGATTTCCTGTCATTGACGAACCTCCTTTGTCCGAATTCCCTGTTTTATATGGTCTAATTCTCAGAGCCCATCTTATCATGTTGTTAAAGAAGAAAGCTTTCTTGTCGGTTCCAATACTAGGATCGGAAAGTGAAGATCCATGTAAGCTATTCTCAGCTGATGATTTTGTAAAGATGGGTTCGGGTGATGTTGAAAGGATTGAAGACATACAATTGACCGATGAAGAAATGGAGATGTTCATTGATCTACATCCGTTTGCAAATACTTCACCTTGTACTGTCTTGGAGACAATGTCAGTCGCGAAGGCTCTCGAGATTTTTCGAGAAACTGGTCTAAGACACATGCTGGTGATACCCAAGGTCCCTGGAAGATTGGCCGTGGTTGGTGTATTGACTCGGCACAACTTCATGCCAGATTACATTCTCAGTTTGCATCCATCGCTAGAGAAGAGCAGATGGAAAAGGTTGAGAATCAAATTTCACTGGAGAAAATTCTTCTAGTGCAGCAGTATCAGACATATTGAAAAG 2653 41.8 MAMKNPLSLPCLLRNHLPILPHRLLLLGLISAPLRALITSEIFDNELFMQDWRSREDFQIFQYLVMKWLSCFLIGLIMGLVGFFNNLAVENIAGKKFVVTSNMMLEGRYGMAFLVFSVSNLVLTLFASVITALICPQAAGSGIPEVKAYLNGVDAPGILSPRTLLVKIVGSISIVSSSMIVGKAGPMVHTGACVASLVGQGGFKIFGLTWRWRYHLKNDRDRRDLVTCGAAAGIAAAFRAPVGGVLFAFEEMASWWRSALLWRSFFTTAIVAVVLRSLIDICLNGLCGLFGKGGLIIFDTYSDFPTYHLEDLPPVFILAFIGGILGSLYNYLLNKFLRIYHLIHEKGVIYKILLACSVSIFTSFLLFGLPWFALCQPCPSSAQEICPTIGRSGNFKKFQCAPGHYNDLASLIFNTNDDAIKNLFSKNTDSEFQLLSMLTFFITCFSLSILSYGTVAPVGLFVPVIVTGASYGRFVGMVVGPYTNLSHGFFAILGAASFLGGSMRTTVSLCVIMLELTNNLLLLPLIMLVLLISKTVADAFNSNIYNLIMKAKGFPYLEGHVEPYMRQLTVADVLTSPLQLFHGIEKVRNIVNILRMTSHHGFPVIDEPPLSEFPVLYGLILRAHLIMLLKKKAFLSVPILGSESEDPCKLFSADDFVKMGSGDVERIEDIQLTDEEMEMFIDLHPFANTSPCTVLETMSVAKALEIFRETGLRHMLVIPKVPGRLAVVGVLTRHNFMPDYILSLHPSLEKSRWKRLRIKFHWRKFF 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 52860680 52866012 + XM_039034246.1 Bhi06g01890 38229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01890 766 SUPERFAMILY CBS-domain pair 560 737 IPR046342 -
Bhi06g01890 766 Gene3D - 558 738 IPR046342 -
Bhi06g01890 766 ProSiteProfiles CBS domain profile. 687 747 IPR000644 -
Bhi06g01890 766 PRINTS Chloride channel signature 136 153 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Chloride channel signature 167 186 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Chloride channel signature 231 250 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Chloride channel signature 456 476 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Chloride channel signature 488 504 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Chloride channel signature 506 525 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Chloride channel signature 544 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi06g01890 766 PRINTS Plant CLC chloride channel signature 41 49 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01890 766 PRINTS Plant CLC chloride channel signature 252 260 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01890 766 PRINTS Plant CLC chloride channel signature 266 276 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01890 766 PRINTS Plant CLC chloride channel signature 284 291 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01890 766 PRINTS Plant CLC chloride channel signature 408 424 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi06g01890 766 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 31 759 - -
Bhi06g01890 766 SUPERFAMILY Clc chloride channel 45 559 IPR014743 -
Bhi06g01890 766 PANTHER CHLORIDE CHANNEL PROTEIN 31 759 - -
Bhi06g01890 766 Pfam CBS domain 689 734 IPR000644 -
Bhi06g01890 766 Gene3D Clc chloride channel 59 557 - -
Bhi06g01890 766 CDD CBS_pair_voltage-gated_CLC_euk_bac 569 739 - -
Bhi06g01890 766 Pfam Voltage gated chloride channel 124 538 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01890 Bhi-Chr6:52860680 Bhi11g00798 Bhi-Chr11:21796059 0 dispersed
Bhi06g01889 Bhi-Chr6:52860680 Bhi06g01890 Bhi-Chr6:52860680 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01890 K05016 - csv:101216071 1318.14