Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01929 AACCAAAAGAAGAATATAAAACACATCTTTCTTCTTCCTCTATTTCTTTGCCTATTTTCCCTTCTCTCTCTCATTTCATTTTGGAATTTTTTAGTTTGCAATTTTCTTTTTTTTTTTTTTTTTTAATTCCAGTCTCTTCTAAAAGCTATATATATATTTGTTTTTTTTTTTTTCCTAATTAATTATCAATCATGTCAAGCTGCATCAACAGTGCTCAAGAACAACTCTGCTATATCCCCTGCAATTTTTGCAATATTGTTCTAGCGGTGAGTGTTCCATGCAGCAATCTCTTTGACATCGTGACCGTCCGATGTGGTCACTGTAGCAATCTCTGGTCTGTGAACATGGCTGCTGCTTTCCAATCTCTCTCATGGCAAAATTCTCAGGCATCAAACCATAGCCACAGTGGCAGTGGAGCTGATCATTACAGAGTTGAATTGGGATCATCATCAAAATGCAACAACAAGATGAAAATGAGAGCACCAATTAAAAACTCTACAAATGATCATGATCAAAGGATCATTAATCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTTATAAAAGAGGAAATCCAGAGGATCAAAGCAACTAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTGGATACCAACAATCTGCAGACTAAGAATGATGCGAGTAATATGGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTATTGATTGAAGAAATGATTATGATAATCTTGAAGGAAGAATTATGATCACTTGAAATTTGGGTATTTTCAAGGGGTCAAAATTAACAGCCCATGCATATGTTTCCTTATTTCCTTTCTATGTTTTATTTGCAATTAGTTTATTGATTGTTAGGGGAAATGTTTGCCTTCTTTAATTATGAACTGAATTTCTCTTCCCTTTATAATGTGTCTGATTTAATAATATGTATGTATCCCCATTTTACTATGAAAGTAAGTTTAATTAATAA 1044 35.25 MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQASNHSHSGSGADHYRVELGSSSKCNNKMKMRAPIKNSTNDHDQRIINRPPEKRQRVPSAYNQFIKEEIQRIKATNPDITHREAFSTAAKNWAHFPHIHFGLMLDTNNLQTKNDASNMGSEKHLMSVPGLHY 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 53614028 53618171 + XM_039033740.1 Bhi06g01929 38268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01929 196 PANTHER AXIAL REGULATOR YABBY 5 1 181 - -
Bhi06g01929 196 SUPERFAMILY HMG-box 110 159 IPR036910 -
Bhi06g01929 196 Pfam YABBY protein 8 166 IPR006780 GO:0007275
Bhi06g01929 196 PANTHER PROTEIN YABBY 6-RELATED 1 181 IPR006780 GO:0007275
Bhi06g01929 196 Gene3D High mobility group box domain 101 161 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01929 Bhi-Chr6:53614028 Bhi10g00206 Bhi-Chr10:4368030 6.36E-62 dispersed
Bhi02g00976 Bhi-Chr2:21993237 Bhi06g01929 Bhi-Chr6:53614028 6.61E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1445 PF04690 YABBY 4.30E-71 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01929 K25796 - csv:101219877 385.571