Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01995 TTGGTCCTCCATGTACTTTGGGCATCATATTCTGACAAACTCAATCTCTCTTTCCTTCATTCCCTCCCTCCCTCTTCCCCAAAATCATGGTATCATCAAAGAAGTTTAGAGGTGTTAGGCAAAGACATTGGGGATCTTGGGTCTCTGAAATTCGTCACCCTCTTCTGAAGAGAAGGGTTTGGCTGGGCACGTTTGAGACGGCGGAGGAGGCAGCCAGAGCCTACGATCAGGCCGCCGTCTTAATGAGTGGCCGGAACGCAAAAACCAACTTTCCAATGAGCCAAACAGCGGCGCAGGAATTAGGAAAACCCAACAACAACAACAATAATAATAATATCACTTCTTCATCTTCTCCAAAGGGCTTATCGGAGATTCTTCATGCCAAGCTCCGAAAATGCAGCAAGGCACCGTCGCCATCGATGACGTGTCTCCGACTCGACACCGAAAATTCCCACATCGGCGTTTGGCAGAAACGTGCTGGTCAACGCTCCGACTCCAGCTGGGTCATGACCGTTCATCTCGGAAAAACGAACTCCTCCTCCTCCTCAACCTCCGCCACCGCCGCCGCCGTATGCGGCGGCGACGGCGACAGTGGGTGGATGAGGAAGAATAAAAAAAGTGGCTGTTTTTCTGGTTTGATCTCGTCGGAAGATGGTGATGGTGCATTAATGGCGGCGAGTGGGACCCAGATGAGGAACTTGGAGATGGATGAAGAAGAAGAAAGAACTGCATTGCAAATGATTGAGGAATTGCTGAGCAGAAATTATGGTAACCCATCGGAAATTATTCAAGTTCAAGATCATAATCAAGGGGAAGCAACCTTTTTACCCTCTCTAATTTAACTAATTGAGATTATATATATATATAAAATTGTGCATCTACAATATGATATGATATGATATAGTGTTAAATTATTAATAACAAGGCTAAATTACCCCCCAAGAAAAAGAAAGAAAGTTTGCCCTTTGTTTAAAA 975 45.33 MVSSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKTNFPMSQTAAQELGKPNNNNNNNNITSSSSPKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQKRAGQRSDSSWVMTVHLGKTNSSSSSTSATAAAVCGGDGDSGWMRKNKKSGCFSGLISSEDGDGALMAASGTQMRNLEMDEEEERTALQMIEELLSRNYGNPSEIIQVQDHNQGEATFLPSLI 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54790122 54791920 - XM_039034712.1 Bhi06g01995 38334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01995 251 MobiDBLite consensus disorder prediction 70 91 - -
Bhi06g01995 251 Coils Coil 202 222 - -
Bhi06g01995 251 Pfam AP2 domain 6 50 IPR001471 GO:0003700|GO:0006355
Bhi06g01995 251 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bhi06g01995 251 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bhi06g01995 251 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bhi06g01995 251 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bhi06g01995 251 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Bhi06g01995 251 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 232 - -
Bhi06g01995 251 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bhi06g01995 251 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Bhi06g01995 251 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01995 Bhi-Chr6:54790122 Bhi09g02244 Bhi-Chr9:63152729 3.72E-72 dispersed
Bhi02g00994 Bhi-Chr2:22244594 Bhi06g01995 Bhi-Chr6:54790122 3.02E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1448 PF00847 AP2 3.70E-12 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01995 - - bhj:120080144 479.944