Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g02018 AGAGAGAGGGAGGAAAGAAGAAGAACAAAAGGCCTTTTTCGCTCCTATCCTTCCTCTCTTTCCTTCGGAGCTCTCTTCAATTCACAGTTCAAAAAAACCCTAAATAATTTGATTTTTCTGCTCTGATTTTTGCTTTCTTTGTGATTGTTTTACGTGAAGGCGAAGGTTTTTTCTGATTTTGGTTTCTTGTTGCTGAGTTTCGGCGTAATATTTGAGCTTCAAAAGCTTAATTTTATCTGGCGGTATTTTGATTGGTAATTGGATCCAGAAGTCAGACGATTTGAAGTTGGTACGGGGAATTCCATTTTTGAATTGAAGAGTTGATTGATTGTTCGAGTTTGATTTTCCTTTTTTGCGGAAAATTTGGAATAGTGGCGAGATTATTGAAATTTAGGATTTAAATTTGATGGGGGAAGAAGATTCCGTAGGTGCGTCTCAGAAGAAGGCTCAATCAGATGGTTCAGCGTTGAGTAATTCTTCGTCATCGGATATTCCGTCTAAGAAGCTCGCTAGGCAGCTCGATTTCACCGGCTATGGAGGGGCCTCGCGTCCTCAATCTCATTCAAACTCGCATTCACAGTCACAGGCTCCATTAGTTGCTCAGAATCTTCCGCAAGCTCAACCAAAACCACCACAGACGCAGATGGTGGCGGCGTCGATCGCACCTTTGGCGCCTCATTCGTCAGTAAGAGCTGTGAAACCAGAATCACCAATGTCAAGAGCAAGACCTGCTGTTGAAGCTAAAGACAGTACTCCTAAGAAGCAAAAACAGTGTAACTGTAAACATTCGCGGTGTCTAAAATTGTACTGTGAATGCTTTGCTTCTGGAATATACTGCGATGGTTGCAACTGCATAAATTGTTATAACAATGTCGAAAATGATGCCGCTAGAAGAGAAGCAGTTGAAGCGACATTAGAGCGTAATCCAAATGCATTTCGACCAAAAATTGCGAGCAGTCCTCATGGGATGCGGGACAGCAGGGAGGAGGCGGGGGAGTTGCTGATGTTGGGTAAGCACAATAAGGGATGCCACTGCAAGAAATCGGGTTGTCTAAAAAAATATTGTGAGTGTTTCCAGGCCAACATTCTCTGTTCGGAAAACTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGGCAAGCTCTTTTCCATGGAGACCATGGTAACAACATGACCTTCATTCAACAGGCAGCGAATGCTGCCATAACTGGAGCTATTGGCTCCTCTGGCTATGCTTCACCTCCTGTATCCAAGAAAAGAAAAGGTCAAGAACTCTACTTTGGACCGACAGCCAAGGACATATCCACTCACAGACCAGTGCCATTTCAACAGGCAAATCATATCAGAGCCACTGCTCCTCCGCTACCGTCCTTCCCCATTGCTGGCGTTGGAAGCCCGTCAGTGTTGGGTCCTTCAAAGTTTACATATAGGTCTTTAATGGCAGACATCATTCAATCACAAGATTTGAAAGATCTTTGCTCTGTTTTGGTTGTGCTGTCAAGTGAAGCTGCCAAGACAATTCAAGACCAAACAAATGCTGCAGAAAAGCAATCTGATGGCCAGACAGAAACTTCTGTTGCATCATCCACTCAAGATAGGTTACAGAAAAAAGATGCATCTGATGAGAAAGCTGCAGCTGATGATCGTTCAAGTGCAAACCAGGCTGATAAAACCACCCCCGATGATTCCAATTCAGATGGTGGAGATGTGCCAAAGGGTGCTCCCATGTCTCCCGGAACTTTAGCTTTGATGTGCGACGAGCAAGATACAATGCTAATGGCTGCTGCTTCCCCCAATAGACTAATTGGTCCTGGCTGCAGCACCTCTTCACAACTGCCTCATGGACGAGACACGTCAGAGGTCTATGCAGAGCAGGAGAGGATTGTCCTTACAAAGTTTAGGGATTGTCTTAATAGACTCATTACTTTGGGAGAAATAAAAGAGACACAATGTTCATCTTTAGCCAGAAATGAAGTAGGTAATCAAGAACAACAATTTAACAATGGCACTACAAATATTAGAACTGAAACTCAAAGTAATTTGGGACAACTCAACAATAAAGTTACAAAATCTACAATTACACCATCGGTGAAGACATCGCAGACAGTAACTCCAGCAGTGATGACCCTTAATAACGACCAGCGACAGAAAGTTTTGCCTCTGTCTTGAAAGTCGTAATCAGCAGACCAAAGATTGACCGAGTTGGTAAAGAAAACTGTAGCCATTCGTTATCGATCAATATGATATTTACCGCTCAGCCCTCATTCTGGGTTGTCCACTCCACACTGTGCTGACCCTTCAGAGTTGGAAGCTATATTTCGATGAAACCGTTCCACGGATTTCTACATTATTGATGTAAGTTAAATTTTGATGCTTTAAGTTCCATTCTTGGTCATTATTGATGCTGTGAAATGCAAAGCTCCATGTTGGCCATTATTGTCATTTAGATATGAAATTGAGTTTCCCATCTTAGCTTTGTAATTGTAGTTATTTTTCCTCCTATTTTGGGAGAGGTGAAAGGTGTTAGGGTTTGTTCTTTTCATATTTCTAGATGAAAAGAGAGATGGAAATCCTTTCGTAACTTATTTCTAATGTGGCCAATTCTAGCTAAGCTAAAATCTGTTGCCCAGTTTCCTCTAGGATTTTTATTTGTCTGAGAATTTTTCCTATTTTACTGAAGCATTGAATAACAAGGGCTTCATAAATCTA 2719 42.04 MGEEDSVGASQKKAQSDGSALSNSSSSDIPSKKLARQLDFTGYGGASRPQSHSNSHSQSQAPLVAQNLPQAQPKPPQTQMVAASIAPLAPHSSVRAVKPESPMSRARPAVEAKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGMRDSREEAGELLMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHGNNMTFIQQAANAAITGAIGSSGYASPPVSKKRKGQELYFGPTAKDISTHRPVPFQQANHIRATAPPLPSFPIAGVGSPSVLGPSKFTYRSLMADIIQSQDLKDLCSVLVVLSSEAAKTIQDQTNAAEKQSDGQTETSVASSTQDRLQKKDASDEKAAADDRSSANQADKTTPDDSNSDGGDVPKGAPMSPGTLALMCDEQDTMLMAAASPNRLIGPGCSTSSQLPHGRDTSEVYAEQERIVLTKFRDCLNRLITLGEIKETQCSSLARNEVGNQEQQFNNGTTNIRTETQSNLGQLNNKVTKSTITPSVKTSQTVTPAVMTLNNDQRQKVLPLS 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 55344757 55349858 + XM_039035102.1 Bhi06g02018 38357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g02018 590 PANTHER TESMIN/TSO1-RELATED 63 574 IPR028307 -
Bhi06g02018 590 PANTHER TESMIN/TSO1-RELATED 26 74 IPR028307 -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 402 418 - -
Bhi06g02018 590 SMART CXC_2 118 158 IPR033467 -
Bhi06g02018 590 SMART CXC_2 203 244 IPR033467 -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 92 120 - -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 1 79 - -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 419 433 - -
Bhi06g02018 590 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 206 240 IPR005172 -
Bhi06g02018 590 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 120 155 IPR005172 -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 378 449 - -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 9 32 - -
Bhi06g02018 590 ProSiteProfiles CRC domain profile. 119 243 IPR005172 -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 378 401 - -
Bhi06g02018 590 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 63 574 - -
Bhi06g02018 590 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 26 74 - -
Bhi06g02018 590 MobiDBLite consensus disorder prediction 44 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01183 Bhi-Chr2:27810723 Bhi06g02018 Bhi-Chr6:55344757 0 dispersed
Bhi06g02018 Bhi-Chr6:55344757 Bhi12g01691 Bhi-Chr12:54742349 9.82E-33 dispersed
Bhi06g02017 Bhi-Chr6:55344757 Bhi06g02018 Bhi-Chr6:55344757 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1451 PF03638 TCR 3.10E-12 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g02018 - - csv:101211978 1096.26