Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00003 CCCAAAAATATTTATTTAGTTTTAAAATATGTAAATATATGTTTGTGTTGGGAAATTCAGCATCGAACAACAAAACCCTACTCCACTTCCCAACTTCATCGCCTCCCACAGCCTCTCGTGCTTCTGCCACTACGCTCCCCCTCCCAGTTCTGAATCTAGAGCGTGGAGCATTTCTCCCTTCAGCCATGGCACTGGTCTTACACGCAGGAAAGACGAATAAAAATTCTTTAAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAATTGGTCTCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTTTTAGAAACGCCCGATGGCGCCATTTTCGAGAGTAACGCAATAGCCCGTTATGTTGCACGCTTGAAGGCTGATAGTCCTCTGTATGGTTCATCTCTGATAGATTATGGGCATATTGAACAATGGATTGACTTTGCAACGTTGGAGATAGATTCTAATATTGTGACTTGGTTTAGACCTAGAATTGGGAGAGCTCCTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTTCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACGTACCTAGTTGGTCATTCTGTTACACTAGCCGACATAATCATGAGTTGCAACCTGTTATTGGGTTTTACTAAGCTCATGACTAAGAGCTTTACCTCGGAGTTCCCACATGTTGAACGGTACTACTGGACCTTGGCCAATCAACCAAACTTCAAAAAAATCCTGGGTGAGGAGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGTAAAGAAACCCGATGAATCTTCTAAGCAAAAGCACACGGATGAGAGTAAGAAAGAAGCTAAAAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGCTGGCGAGGGAGAGGATGAGGCACCAAAGCCAAAACCCAAAAATCCTCTTGATTTGCTACCTCCCAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGATTACAAGTACAATGATGAGAATACTGTTTCATTCGTGACTTTGAACAAGGTTGGTGGCTTTCTCCAGCGAATGGATCTCGCTCGTAAGTATGCTTTCGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGTTTATGGCTTTTCCGTGGACAAGAGATCCCAAAATTCGTCCTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGGAAGGTTGATCTATCGGACGAGGCACAAAAGGAACGCGTAAACCAGATGATTGAAGATCAGGAACCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGATGAAGTAATCATCTTATCTTAACGGGTGTTGTTAGTTTCCTTTTGAGTTGAGAGTTCAAGCATCATTATGGTACATCTTAATTTACGAATCTTTATTTCTGTCAAGTGTGATTAGACAGCTATTTCCCTCAAAAGGAAGAAACAAAAAGGAAAAAAAAAAAAAGAAAATAACAGTAAGTAAAAAAATGTGTGTTTTAGAATCATATTCTCCTTTTTGGTTCATGAAAGTATAAAATAAAAGCTCATGATTTCCACACCA 1713 41.62 MFVLGNSASNNKTLLHFPTSSPPTASRASATTLPLPVLNLERGAFLPSAMALVLHAGKTNKNSLKALIAAEYNGVEVKLVSDFEMGVSNKTPEFIKMNPIGKVPVLETPDGAIFESNAIARYVARLKADSPLYGSSLIDYGHIEQWIDFATLEIDSNIVTWFRPRIGRAPYLPPVEEAAIASLKRALGALNTHLASNTYLVGHSVTLADIIMSCNLLLGFTKLMTKSFTSEFPHVERYYWTLANQPNFKKILGEEKQAESVLPVQSVKKPDESSKQKHTDESKKEAKKEAEKEKPKAVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDLSDEAQKERVNQMIEDQEPFEGEALLDAKCFK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 185996 188975 + XM_039037061.1 Bhi07g00003 38392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00003 471 MobiDBLite consensus disorder prediction 262 318 - -
Bhi07g00003 471 SFLD Main (cytGST) 53 241 - -
Bhi07g00003 471 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 50 471 IPR044628 GO:0004364
Bhi07g00003 471 CDD GST_N_EF1Bgamma 52 126 - -
Bhi07g00003 471 Pfam Glutathione S-transferase, C-terminal domain 177 246 IPR004046 -
Bhi07g00003 471 MobiDBLite consensus disorder prediction 270 311 - -
Bhi07g00003 471 Gene3D - 129 266 - -
Bhi07g00003 471 SFLD Glutathione Transferase (cytosolic) 53 241 IPR040079 -
Bhi07g00003 471 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 50 131 IPR004045 -
Bhi07g00003 471 SUPERFAMILY Thioredoxin-like 48 134 IPR036249 -
Bhi07g00003 471 CDD GST_C_EF1Bgamma_like 139 259 - -
Bhi07g00003 471 Gene3D Glutaredoxin 49 123 - -
Bhi07g00003 471 PANTHER - 50 471 - -
Bhi07g00003 471 SMART EF1G_2 310 418 IPR001662 GO:0003746|GO:0006414
Bhi07g00003 471 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 136 264 IPR010987 -
Bhi07g00003 471 Pfam Glutathione S-transferase, N-terminal domain 59 125 IPR004045 -
Bhi07g00003 471 Pfam Elongation factor 1 gamma, conserved domain 310 418 IPR001662 GO:0003746|GO:0006414
Bhi07g00003 471 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 311 471 IPR036433 GO:0003746|GO:0006414
Bhi07g00003 471 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 311 471 IPR001662 GO:0003746|GO:0006414
Bhi07g00003 471 SUPERFAMILY GST C-terminal domain-like 122 262 IPR036282 -
Bhi07g00003 471 SUPERFAMILY eEF1-gamma domain 311 471 IPR036433 GO:0003746|GO:0006414
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00931 Bhi-Chr4:23749034 Bhi07g00003 Bhi-Chr7:185996 7.36E-65 dispersed
Bhi07g00003 Bhi-Chr7:185996 Bhi11g00743 Bhi-Chr11:19513274 0 dispersed
Bhi07g00003 Bhi-Chr7:185996 Bhi07g00004 Bhi-Chr7:186031 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00003 K03233 - zju:107412556 723.391