Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00017 TAAAAAAAAGTAGCCGTCTTCTCATTCTCCCGCTCCACTTCCCAAAATCTTCCCTCTCAAATCTCCATCTCAAAATTTCATCTTATTTTCCATTTCATTGTTCCAAGTGTCGTTTCCATTCAATTCACCATTTGGGTTTTCTCCCTGCTTTACCCAGTGGTCAAGCCCAAGGAAGAACAATCCGCTCAATCTACAATTAACCATCCAAATCACAAGGGTTTAGCTAAGTTTGTTGATTAGAGTGTGAATATGATGGAGGAAGATGCCAAAGCACAGCCGAAGGCTACAGAAATCCAGGCAAAGAAAACCCTGGTTTCTCAGTTGCCTTGTGACGGCGATGGCATTTGCATGCTCTGCAAGGCCAAGCCTTCTGACTTGGAGACGATCACTTGCAAAACTTGTGTCACCCCTTGGCATGTTAGTTGTCTCTCAAATCCCCCTGAAACCCTGGCATCCACCCTTCAATGGGACTGTCCTGATTGTTCCACCCCTCCTGAAGATGTTCCCCTTCCTCCGCCAGGCAACCATTCACTTCCAACTGATCGTTCTAGTGACCTTGTTGCAGCGATTCGAGCCATTGAGGCAGATGTTTCCCTTACTGACCGTGAGAAGGCAAAGAAGCGCCAGGAACTTCTCAGTGGAAAGTTGCAGTCAGACAAGGATGACCATGATACCAACAAGGAAAAGAAAAAAAAGGGGGACGATGTTTTTGATTTGTTTGACGAGAGATTGAACTGCTCCTTCTGCATGCAGTTACCAGATAGGCCTGTCACTACACCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGCCGCTGCGTGATTCCCTCCAAAATGGCTAGCCAGCCCCGTATTAACTCCACCCTTGTAGTGGCCATTCGTATGGCTAAATTGTCAAAATCATTTGCTTCCGGTGGACCTCAGAAGGTCTATCATTTTGTCCACAATCAAAATAGACCAGATAAAGCCTATACCACTGACCGGGCACAAAGAAAAGGAAAAGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTACTGCCGAAAATGATCCTGAGAGAAACCAGGGTGTTCTGGTTGGTGAATGCTGGGAGGATAGGCTAGAATGTCGTCAATGGGGTGCTCACTTTCCACATGTTGCAGGTATAGCAGGACAGTCAAATATTGGTGCACAGTCGGTGGTTCTTTCTGGTGGCTACCAAGACGATGAAGATCATGGGGAGTGGTTTCTCTACACTGGAAGTGGGGGTCGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAATCTTTCGACCAGAAATTTGAAAAATCAAACAAAGCACTACAAGTTAGTTGTGCAAAAGGTTATCCAGTTAGGGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCGTATGCTCCAGAGAAGGGATTGCGGTATGATGGAGTTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGGCTTTAAGGTATGTCGCTATTTATTTGTTAGATGCGACAATGATCCTGCTCCATGGACAAGTGATGAACATGGAGACCGACCTAGACCCTTACCTGCAATTTCAGAGTTGAAAAAAGCTACAGATATTACAGAGAGGAAGGAAGGTCCATCATGGGACTTTGATGAGAAAGACGGTAAATGGAAGTGGCTCAAAGATCCACCAACGAGCAAGAAACCAGTTGAAGCTCAAGATTCTACTGGGAAGAGGACAAGGATAAAAAGGAAATCATATAATCTGAGTGTCCGAGAAAAGTTACTGAAAGAGTTTAGCTGCCTTATTTGCCGGGAGGTGATGACTTTGCCAATTACTACGCCTTGTGGTCATAACTTTTGCAAGTCATGCTTGGAAGGCGCTTTTGTGGGGAAGACATTCTTGAGAGAGAGAAAAACTGGTGGAAGGTCTCTTAGATCTCAAAAGAATGTCTTGAGTTGTCCTTGTTGCCCCACGGATATCTCTGATTTTCTACAGAATCTTCAGGTAAATAGAGAGTTGTTGGATGTGATAGAGTCGTTAAAAAGTAAGATTGAAGAAGGGGATGATGCATCTGAGAAGCTGTGTGAAGAAGAGAGAGATGGGGAAGAGGAGGAAGATAAGGATGAGGAAGAGGATGAAGGGAAGGGAAAAGATGAAAGCAGTAGTCCTGTCGAAACAAGAAAACGAGCAAAGGTGGACGATTCGGAATGAAAGAAGTAAACAAGTGGTGTTTTTTGGGGCCTTGGCTGGGCCTGGAGAAGTAGAGATGACTGAGATTTTGTATTCTGATTGATGGGTATTTACCATAATTTTAGGTAGATATGAATGTGGCTCATGTGATTTGATTTGAACACAGTATAAGGTGACCGTGTTGTTAACTTGTTGGAGATATGGTAGGTAGACACATATTTTAGTTGTATTGTCTCTTTAGACAACATGTGTGTAAATTGGTCAGTTCAGTTGAACTCTATTTTGTAA 2526 43.51 MMEEDAKAQPKATEIQAKKTLVSQLPCDGDGICMLCKAKPSDLETITCKTCVTPWHVSCLSNPPETLASTLQWDCPDCSTPPEDVPLPPPGNHSLPTDRSSDLVAAIRAIEADVSLTDREKAKKRQELLSGKLQSDKDDHDTNKEKKKKGDDVFDLFDERLNCSFCMQLPDRPVTTPCGHNFCLKCFQKWIGQGKNTCAKCRCVIPSKMASQPRINSTLVVAIRMAKLSKSFASGGPQKVYHFVHNQNRPDKAYTTDRAQRKGKANAASGKIFVTIPSDHFGPITAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSNIGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKALQVSCAKGYPVRVVRSHKEKRSSYAPEKGLRYDGVYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPWTSDEHGDRPRPLPAISELKKATDITERKEGPSWDFDEKDGKWKWLKDPPTSKKPVEAQDSTGKRTRIKRKSYNLSVREKLLKEFSCLICREVMTLPITTPCGHNFCKSCLEGAFVGKTFLRERKTGGRSLRSQKNVLSCPCCPTDISDFLQNLQVNRELLDVIESLKSKIEEGDDASEKLCEEERDGEEEEDKDEEEDEGKGKDESSSPVETRKRAKVDDSE 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1151404 1159830 - XM_039035400.1 Bhi07g00017 38406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00017 669 MobiDBLite consensus disorder prediction 126 148 - -
Bhi07g00017 669 ProSitePatterns Zinc finger RING-type signature. 548 557 IPR017907 -
Bhi07g00017 669 Pfam Zinc finger, C3HC4 type (RING finger) 163 201 IPR018957 GO:0046872
Bhi07g00017 669 SUPERFAMILY PUA domain-like 265 460 IPR015947 -
Bhi07g00017 669 ProSiteProfiles Zinc finger PHD-type profile. 30 81 IPR019787 -
Bhi07g00017 669 SUPERFAMILY RING/U-box 155 209 - -
Bhi07g00017 669 CDD RING-HC 163 201 - -
Bhi07g00017 669 Coils Coil 610 630 - -
Bhi07g00017 669 MobiDBLite consensus disorder prediction 647 669 - -
Bhi07g00017 669 MobiDBLite consensus disorder prediction 618 669 - -
Bhi07g00017 669 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 82 IPR013083 -
Bhi07g00017 669 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 488 621 IPR013083 -
Bhi07g00017 669 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 229 IPR013083 -
Bhi07g00017 669 ProSiteProfiles YDG domain profile. 291 439 IPR003105 -
Bhi07g00017 669 Gene3D - 262 458 IPR036987 -
Bhi07g00017 669 ProSiteProfiles Zinc finger RING-type profile. 533 589 IPR001841 -
Bhi07g00017 669 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 22 654 IPR045134 -
Bhi07g00017 669 SMART ring_2 163 201 IPR001841 -
Bhi07g00017 669 SMART ring_2 533 589 IPR001841 -
Bhi07g00017 669 Pfam RING-type zinc-finger 533 587 IPR027370 -
Bhi07g00017 669 SUPERFAMILY FYVE/PHD zinc finger 25 85 IPR011011 -
Bhi07g00017 669 SUPERFAMILY RING/U-box 526 614 - -
Bhi07g00017 669 ProSitePatterns Zinc finger PHD-type signature. 33 78 IPR019786 -
Bhi07g00017 669 SMART PHD_3 32 79 IPR001965 -
Bhi07g00017 669 MobiDBLite consensus disorder prediction 491 511 - -
Bhi07g00017 669 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 22 654 - -
Bhi07g00017 669 Pfam SAD/SRA domain 294 442 IPR003105 -
Bhi07g00017 669 ProSiteProfiles Zinc finger RING-type profile. 163 202 IPR001841 -
Bhi07g00017 669 SMART G9a_1 286 443 IPR003105 -
Bhi07g00017 669 MobiDBLite consensus disorder prediction 624 646 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00017 Bhi-Chr7:1151404 Bhi10g01773 Bhi-Chr10:44650958 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00017 K10638 - csv:101219001 1243.41