Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00084 ACGAGTCATAACAAAAAAAATAAAATAAAATAAACGTCTTCCCACTATTTCCCATTAATTTGTGTTGTGGCCTCTGGCTTGAACTAACCTAAGGCAGAGTTGTCTCTGCCTTAGCCATTAGCCATTAAGCAAATTCATCCATCATGGTGTTCCAAGATTTTGACCAAATCTCTGAACGCCGACGTGCCGAGAGGGCTCGTAAGTTTCGAAAAAGAGTTACCATTGCTGTGGTCTCGGTTTCTGTGATCCTCCTTGTCATTGCTGCGGCCGTGTTCGTCCAGGTTTCCTCCTCCTCCAAATCCACCACCAAAAATGGCAATAGCAAGAGCAGTAGCAGCAACGAAAACTCCAAAGAAACCGTGCCAGACGACGTGAAACAGGTGTCGCGCGTCGAGAAAATGATAACCATGATATGCAACTCGACAGACTACAAAGGCAAATGCGAAAGCACTCTGAAGGATGGCATCCACACGGATTCTAATTCCTCGGACCCGAAAGACTTGATCAAGCTGTCGATCTCAGCAGCGGCAGACGAGGTGAAATCTGCAGTGAAAAAGGCAACGGGGTTCAACTTCGCAACGGCGGAGGAAAAGGGTGCATTCGAGGACTGCAAGGTGCTGTTGGAAGACGCGGTGGAGGAATTGGAGATGTCTATGAGCCAAGTGAGCATTAAGAATATGGGAAAGCTGACGGCGAAAACGACACCAGATCTGAACAACTGGCTAAGCGCGGTGATGTCATATCATGAAACTTGTGTTGATGGGTTCCCAGAGGGGAAGATAAAAACCGAAATGGAGAAGGTGGTGAAGAATGGAAAGGAACTCACCAGTAATTCCTTGGCCATGATATCACAGGTGGCTTCTTTCTTCTCGACGTTCGAGATGCCCGAGGGAGCTGCGACACGACGTCGTCTTATGGCCAGCAATGGGTTCCCAACTTGGATGAACAGCAATGAGCGGAGGATGTTGAAGGGCGCTACCGCTGGGGATAAGCCAAAGCCTAACGTTGTGGTTGCCAAAGATGGCTCTGGAGATTTCAAAACTATTAATGAAGCCTTGGCTGCCATGCCTGCCAAATATGATGGACGGTACGTGATCTATGTGAAGGAAGGAATCTACGAGGAGACCGTGGTGATTACTAAAAAGATGGTTAATGTTACAATGTACGGAGATGGATCTCAAAAGAGCATGATCAGTGGGAACAAGAACTTTGTGGATGGAGTTAGAACCTTCCAAACCGCAACATTTGTGGCACTTGGAGAAGGGTTCTTCGCGCAGGCCATAGGATTCAGAAACACAGCAGGTCCAGAAAAGCACCAAGCCGTCGCGGCTCGAGTCCAAGCAGACCGAGCCATATTCTTGAACTGCCGGTTCGAGGGGTACCAGGACACATTATACGTCCAAGCCCATCGCCAATTCTACAGAAGCTGTCTCATAACAGGCACCATCGACTTCATCTTCGGCGACGCGGCCGCCTTTTTCCAAAACTGTAACATGATGGTCAGGAAGCCATTAGACAACCAACAGAACATAGTGACAGCACAGGGCAGAACCGACAAGCATGAAACCACAGGCATTGTCCTTCAAAACTGCAAGATTTTGCCTGACAAGACACTTGAGCCAGTGAAGTCCCAATTCAAAAGCTACTTGGGAAGGCCTTGGAAAGAATTCTCAAGAACCATTGTAATGGAGTCCACAATTGAAGATATCATTCATCCTGATGGGTGGATGCCTTGGGAAGGGGATTTTGCACTGAAAACCTTGTACTATGCTGAATTTAACAACCAAGGGCCTGGGGCTAAGACTGATGGTAGAGTCAAATGGCCTGGCTACAAGGTGATTGATAAGGACGAGGCTGCAAAGTTTACAATAGGAACTTTTCTAGAGCTGGATTGGATCGAGAGCACCTCCGCTCCTGTTCATGTCGGCCTATTTTGATATAACACAAAGAACACAAATCCTTTTTTCTCATTCTGTCCCTTGCCATTCATGCATGCATGCCTCTTCAATTTCTCTATATCCATTTTTTTTATTTCTAATTCTACTTGTACTTATACCTATACCACACCCATATACTCTTAACACAAAA 2088 46.6 MVFQDFDQISERRRAERARKFRKRVTIAVVSVSVILLVIAAAVFVQVSSSSKSTTKNGNSKSSSSNENSKETVPDDVKQVSRVEKMITMICNSTDYKGKCESTLKDGIHTDSNSSDPKDLIKLSISAAADEVKSAVKKATGFNFATAEEKGAFEDCKVLLEDAVEELEMSMSQVSIKNMGKLTAKTTPDLNNWLSAVMSYHETCVDGFPEGKIKTEMEKVVKNGKELTSNSLAMISQVASFFSTFEMPEGAATRRRLMASNGFPTWMNSNERRMLKGATAGDKPKPNVVVAKDGSGDFKTINEALAAMPAKYDGRYVIYVKEGIYEETVVITKKMVNVTMYGDGSQKSMISGNKNFVDGVRTFQTATFVALGEGFFAQAIGFRNTAGPEKHQAVAARVQADRAIFLNCRFEGYQDTLYVQAHRQFYRSCLITGTIDFIFGDAAAFFQNCNMMVRKPLDNQQNIVTAQGRTDKHETTGIVLQNCKILPDKTLEPVKSQFKSYLGRPWKEFSRTIVMESTIEDIIHPDGWMPWEGDFALKTLYYAEFNNQGPGAKTDGRVKWPGYKVIDKDEAAKFTIGTFLELDWIESTSAPVHVGLF 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4486044 4488443 - XM_039037243.1 Bhi07g00084 38473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00084 597 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 238 IPR035513 -
Bhi07g00084 597 ProSitePatterns Pectinesterase signature 2. 431 440 IPR033131 -
Bhi07g00084 597 SMART PMEI_2 82 234 IPR006501 GO:0004857
Bhi07g00084 597 Pfam Plant invertase/pectin methylesterase inhibitor 86 234 IPR006501 GO:0004857
Bhi07g00084 597 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 239 IPR035513 -
Bhi07g00084 597 TIGRFAM PME_inhib: pectinesterase inhibitor domain 84 238 IPR006501 GO:0004857
Bhi07g00084 597 Pfam Pectinesterase 287 581 IPR000070 GO:0030599|GO:0042545
Bhi07g00084 597 MobiDBLite consensus disorder prediction 51 77 - -
Bhi07g00084 597 CDD PMEI-like_3 90 240 - -
Bhi07g00084 597 SUPERFAMILY Pectin lyase-like 284 581 IPR011050 -
Bhi07g00084 597 MobiDBLite consensus disorder prediction 51 70 - -
Bhi07g00084 597 PANTHER PECTINESTERASE 14 595 - -
Bhi07g00084 597 Gene3D - 281 596 IPR012334 -
Bhi07g00084 597 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 14 595 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00084 Bhi-Chr7:4486044 Bhi12g01027 Bhi-Chr12:31257039 7.80E-176 dispersed
Bhi07g00084 Bhi-Chr7:4486044 Bhi12g02036 Bhi-Chr12:63545398 3.40E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00084 - - csv:101211510 1038.48