Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00102 TCGTGATAGTAACATCGTAAACGTTGGCATGCATATGCAACTAGCAAAAGATTGGTGGGAAGAAGCAGGGCAGCGATGGAGAGTGGAAAGTTACCGATTCTCAGAATTCGCGTCGTGAAATTCCTAATTCAATCTGCTCATGATCTTGAAGTGGCTCCAATCGTCAAATATTCTGCGTTGTCGCTTTTCGCTGATAGATTCTACCGATCGCTTTCTGGATTCACCACCTGCAGCAATGACTCAAGATATTGGCTTCTGCAACCAATCACAGAAAGCAATTTGCAGTTATTTGCACTTGCTTCCTTATGGATATCTAGCAAATTGCACACTTCTCATCCTCTTTCTATAAAACTTCTGAAGTCTTTTGGGGATAAGATGATTAAAGAACAACACTTCATGACACGGGATTTATTGGATGCAGAGGTCCTATTCATGCAGATATTGAAGTTCGAGATTGGTACTGCGAATATCACTTTTATATTTCTTGAGGAACTTCTTATTCAATTGAAGAAAGTAGCAAAAGTTGGGGAGCTTGTGAACTGGGAAGCATGCATGGACGTAATGGATCTACTATATGAAAAAGAGGAGACATCTGTGTTTTACAGTTCTCCTTATTCTTTAGCTGCTGCCATCTTGGTTGCTTCATATCTCATCACTGTTCCAGTTCAAGAATGGGAATTTCCAGTTATTCCCTGGGTCCAGTTTGTAACACCATTCAAAGAAGACGATATTGTACATCAAGTCAGAGACATTCTACTTCACGTTTTAGAGACTGATTGATAGAGAAACATCAAAGGCTTGATAAGAGAGCAGCTCATCATGAAATGTAAGTTCTGTTGTTCTTCGTGCCATTTTTTGGCTTGTTTGTAGAAGTTTCTGCTAGGGAGGAACTAAACTAACTGCATTGTGGCTTTCAAAGTTTTTGAGATTTGAGGTTTTTTTCATTAAATTTCAAGTTTTAAATTTCTTAAATTTATTGTTATATTTATTTTCAGATGTCTAAGTAAATGTTAGATCTAAGATTTAAGTTGTTTGTTATTTTTAAGTTTTTCTTTTTTTTTTTTTGTGAGTTTCTATTTTTAATATTGTTTTAAATTATAAGTTAGTAGTATTAATTAAGTTCATATCCTTGTCCTATATAAGGGTTTGAGCTACCATGTATTGAGTATCAATATTTTATGTATTAAAATTTTGTGTACCATATTTTGTGTCACAATTTTAGTATCATATTTGTTGTATCACAGTTCTTATACAACATTTGTGTATCTACTTCAATAGGAAGTTTGAATTTCACTCTCATTTT 1303 34.54 MESGKLPILRIRVVKFLIQSAHDLEVAPIVKYSALSLFADRFYRSLSGFTTCSNDSRYWLLQPITESNLQLFALASLWISSKLHTSHPLSIKLLKSFGDKMIKEQHFMTRDLLDAEVLFMQILKFEIGTANITFIFLEELLIQLKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPYSLAAAILVASYLITVPVQEWEFPVIPWVQFVTPFKEDDIVHQVRDILLHVLETD 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6422695 6451360 + XM_039037359.1 Bhi07g00102 38491

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00102 234 Pfam Cyclin, N-terminal domain 56 127 IPR006671 -
Bhi07g00102 234 SUPERFAMILY Cyclin-like 7 127 IPR036915 -
Bhi07g00102 234 Gene3D - 6 127 - -
Bhi07g00102 234 PANTHER CYCLIN-J18 10 233 - -
Bhi07g00102 234 PANTHER CYCLINS 10 233 IPR039361 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00102 - - - cmos:111458921 409.453
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00101 Bhi-Chr7:6422695 Bhi07g00102 Bhi-Chr7:6422695 8.15E-153 tandem
Bhi07g00102 Bhi-Chr7:6422695 Bhi07g00103 Bhi-Chr7:6422695 4.56E-152 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g549 . . . . . . . . . . . . . . . . Cpe01g01663 Bhi07g00102 . . . . . . . . . . . . . Cone13ag0721 Cone19ag0720 . . . . . . . . . . . . . . . . . . . Car04g01888 . . . . . . . . . . . . . . . . . . Csa05g00993 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011724 1 3 0 1 0 1 1 1 1 1 0 1 1 0 1 0 1 2 1 1 1 1 2 1 1 1 1 1 1 2 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g00102 Bhi_Chr07 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0