Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00153 ATGGGAGTGGTTCCAATGGCGACTTTGAGCAATGGCCAGTCGATACCCGTTATCGGGATGGGGACGATGTCGATGGTCGGACCAGAGGCGACGAAAGTTGCCGTGGTGGAGGCGATCAGAGTCGGATACCGACATTTTGATACGTCGTATTCGTACGGATCGGAGAAGGCTCTTGGGGAAGGGATTAGTGAGGCTTTGGGAGTAGGGCTTATAAAATCAAGAGATGAACTCTTTGTGACCTCTAAGTTGGCTTCTGGTTTTGCTGATCCTTCACTTGTTCTTCATGGGATTAAGGCCACTCTCAGGAACTTGGGAATGGAATATGTTGATATGTACTTGATCCACATTCCATTGAAGTTGAATCCTGAAGTATGTAAAGTCCCAGTTGCAAAGGATGACATTTCTGCAATTGATCTCAAAGGAGTTTGGGACAAAATGGAAGAATGCCAAAACCTTTCTCTCACCAAAGCCATTGGTGTCAGTAATTTCTCTCCCAAAAGGCTTCAACAACTTCTTTCCTTTGCAAAAATACCCCCAATACTCAATCAGGTTGAGATGAGCCCACTTTGGCATCAAAATAAACTAAGAGAGTTTTGTAAAGCAAAAGGGATTCATGTAACGGCCTATTCTCCTCTAGGTGCAGTTGGGACTCATTGGNGCCACGATAAAGTTGTGAGCTCTGATGTTATTGCTCAAATTGCCAAGGCCAAAGGCAAAACAACTGCTCAGATTGCATTGAGATGGGTGTATGAGCAAGGGGTGAGCATAGTGGCAAAGAGCTTTGACAAAGAGAGAATGAGAGAAAACATTGACATTTTTGATTGGTCATTGAGTGAAGAGGAATCAGCTAAGATTGGCCAACTTCCTCAGCACAAAGCTGTTNGTTTTGCCAATATTTATGGCCAACATGATGTGGTTCTTCACCTTGATGCTGAGCTTTGA 942 44.06 MGVVPMATLSNGQSIPVIGMGTMSMVGPEATKVAVVEAIRVGYRHFDTSYSYGSEKALGEGISEALGVGLIKSRDELFVTSKLASGFADPSLVLHGIKATLRNLGMEYVDMYLIHIPLKLNPEVCKVPVAKDDISAIDLKGVWDKMEECQNLSLTKAIGVSNFSPKRLQQLLSFAKIPPILNQVEMSPLWHQNKLREFCKAKGIHVTAYSPLGAVGTHWXHDKVVSSDVIAQIAKAKGKTTAQIALRWVYEQGVSIVAKSFDKERMRENIDIFDWSLSEEESAKIGQLPQHKAVXFANIYGQHDVVLHLDAEL 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8162452 8165743 + XM_039037287.1 Bhi07g00153 38542

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00153 313 PIRSF AKR 3 308 IPR020471 GO:0016491
Bhi07g00153 313 ProSitePatterns Aldo/keto reductase family signature 2. 146 163 IPR018170 GO:0016491
Bhi07g00153 313 PANTHER ALDO/KETO REDUCTASE 10 312 - -
Bhi07g00153 313 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Bhi07g00153 313 PRINTS Aldo-keto reductase signature 99 117 IPR020471 GO:0016491
Bhi07g00153 313 PRINTS Aldo-keto reductase signature 146 163 IPR020471 GO:0016491
Bhi07g00153 313 PRINTS Aldo-keto reductase signature 180 209 IPR020471 GO:0016491
Bhi07g00153 313 PRINTS Aldo-keto reductase signature 224 248 IPR020471 GO:0016491
Bhi07g00153 313 Pfam Aldo/keto reductase family 18 286 IPR023210 -
Bhi07g00153 313 PANTHER D-GALACTURONATE REDUCTASE-LIKE 10 312 - -
Bhi07g00153 313 CDD AKR_AKR4A_4B 11 290 IPR044497 GO:0016616
Bhi07g00153 313 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Bhi07g00153 313 Gene3D - 2 309 IPR036812 -
Bhi07g00153 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 257 272 IPR018170 GO:0016491
Bhi07g00153 313 SUPERFAMILY NAD(P)-linked oxidoreductase 7 298 IPR036812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00153 K19642 GALUR; D-galacturonate reductase [EC:1.1.1.365] - csv:101206206 558.14
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00893 Bhi-Chr6:23577714 Bhi07g00153 Bhi-Chr7:8162452 1.71E-159 dispersed
Bhi07g00153 Bhi-Chr7:8162452 Bhi03g02036 Bhi-Chr3:43827679 1.36E-72 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g558 . . . . . . Bma14g01967 . . . . Cma04g00024 . Car04g00033 . . . Bhi07g00153 . . . Hepe01g0358 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi1g1075 Blo01g00385 . . . . . . . . . . . . . . . . Bhi07g00153 . . . Hepe01g0358 . . . . . . . . . . . . . . . Chy10g00095 Cme10g01125 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g01008 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003041 0 2 2 1 1 2 1 2 2 3 2 2 1 2 3 1 2 2 1 2 3 1 3 2 2 2 1 1 1 3 53