Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00157 CATATTTCTTTCACAAAAACTTTGATTAATTTTCATTTCTATAAACATTATCTTTTATTTTGTCTCTAGAAAATGGAAGGAGGAGGAAGTTCTAGAAGCAATAACAAAGCTAGTAATCACAAGGATTCCAATGGTCTCATTGATGTTTTGTTTTCTTGGGACTTTAAGAATGTGTTCAATCAAAACTTCTACAAACTCAAGGTGGGAAAGATTCCAAAATCATTTGAATCAGAGGAGCAATACAAAGGCTCATACCTATTCCCTTTGTTAGAAGAAACAAGAGCAGAATTATGTTGTAGTTTGAAGACAATTCACAAAGCACCTTTCTCACAAGTGGTTTCTATTGAACATTCAAACAAAAAAAAAGGCAAAACCATGTTCTCTGTTAATGTTAGCACTTGGATAAACACTAATAAGAAGGGACATCAACCATACAAAGCACTTCCTGGGGATATTTTTGTAATTTTGGACATTGACCCTCAAACTATTTCAAGTGATTACTTGGAAAGCTCCTCAGAACTTAATTGGGCTTTTGCTTGGTTAGGACAAGCTAATGACAATAATACCCCTTCTAATCTCAAGCTTCATATTTCCAACAACATGGATCAAGTTGATGTACACAAATCAACCACACTTTTCATTGTTTTTCTTATGAATGTGACAACCAACTTGAGAATATGGAAGGCATTACAAGGTTCTACTGATGGCGGGATCATCAAACATATTTTGGGCACAACCTCGACGGGTAATCAAACCTGCAAACAATGCAATCAAAATGGAGAAGATTCAACTCAAAATTTCCCAACACTATGCTTATCATCATTGAATGAATCCCAAAAAGTTGCAATAGAAAGTTGCATAAAAAATGTTATTTGCCAACACAAGCCTTCAATAGAGCTTATATGGGGGCCACCAGGTACAGGCAAAACCAAAACTACAAGTATATTACTTTGGAAAATCTTAAGAATGAGACACCAAATTAGGACTCTTGCTTGTGCACCCACAAATATTGCCATTACAAATCTTGCCTCTCAAGTTGTGAAGTTACTAAAACATGATTCCCTTAGTAAAAATGACTTCTTTTGCCCTTTGGGAGAATTGCTCTTATTTGGGAACAAAGATAGACTTAAATTTGATTCTCAATTGGAAGATATTTATTTGGATCATAGAGTTGAAAAGCTTTTCAAATGTTTAGGACAAAATGGTTTGAAGTTTCAAATAACATCCATGATAGGGATTCTGCAAGAAAATAAGCCATCAAAAATGAAGAGAATGTTCAAATCCATTGGTTCTTCAATTTTAGAATGTGTCAATATTTTAGTAACTCATATACCTAAACAAGTCATTATGGAGCATAATTTGGAAAAAATGGAGATTCTTGTTGAGTTGATTGGGTGTATTGGAACCCTTTTGAGGAAAGGTTATGATGATGATAAAGTGAGAGAAAGTTTGGTTGATTTGAAGTGTCATTGTTTGTTGGTTTTGAGGACACTTTTGGTTTCTCTTGATGAAATTGAAGTTCCAAGTAAAGTAAGCAAGAATTCAATTGAGAAGTTTTGTTTTCAGCAAGCTTCTTTGATTTTTACCACAGCTTCAAATTCCTTCAAACTAAACTCAGTGAAAAAGAATTCACTGAATTTGTTGGTTGTTGATGAAGCTGCACAATTGAAGGAGTGTGAATCACTTATACCTTTGCAACTTCAACATATAAACCATGCTATTCTTATTGGTGATGAGTTCCAATTACCAGCAACAATAAAGAGCAAGGTTTGTGAAGGAGCTAAATTTGGTAGAAGCCTTTTTGAGAGGCTAAGTTTATTAGGATACTCAAAGCACCTATTGAATACACAATATAGGATGCATCCATTAGTGAGTTGCTTCCCAAATTCCAAATTTTATGGAAATAAAATTTTGGATGGTTCCATTGTAATGGATAAAGAGTATGAAAAACATTACCTTCCAAGTCCTCTATTTGGACCATATTCTTTCATCAATGTTTGTGGTGGACAAGAGGAAAGCAATGGTGATGGACAAAGCAAGAAGAATATGGTTGAAGTAGTTGTTGTTACCCAAATTATCCAAATGCTTTACAAAGCATGGTGCAAGAACAAGAAGGATCTTAGCATTGGAGTAATATCTCCTTATGCTGCACAAGTTTCATCAATTCAAGACAAATTTGGAAGAAAATATGAGAAGAATAATGAAGGATTTAGAGTAAAAGTAAAGTCTATTGATGGTTTTCAAGGTGGTGAAGAGGATGTGATCATAATATCCACAGTCAGATCCAACAATGGAAAAAGCATTGGATTCCTCTCAAGTACACAAAGAACCAATGTTGCTCTTACAAGAGCAAGGTTCTGCCTTTGGATTGTGGGAGATGCAACAACTTTAGGAAAGAGCAATTCAGAATGGAGAGATGTTGTTAATGATGCCAAGGCTCGAAAATGTTTCTTTAATGTTGAGGATGACAAAGAGTTGGCAGATGGAATGAGAATGATAAAAACTTGGCAAATCTCTGATATCAAAGAAGAGATCCTCAAACTTGATAACATTTACAACAATGATCACAGAGGAGTTTGATTGCTATTTACACTTATGAAGATTATGAGTATTAAATTTGTAGTATATTAATGAGATAGAAAATTTTATATTGTGATATACATGAGTGGGATCCCGTGGCGGATAGCTTTGGTGTGTTCTTTGTTCCAAGTGTTTGAGGGGCCCTTAGGCCTAAGCGAAAGTAGGGTGTTGTGTGTCACAGTCATATTTGTTCAAGGCACGGTGCCCATGGCGTGTGCATGCTCTTCTCAACCTCATTTTATCATACTTTCATCTTGTGTAATTCATTATGTAATTTAGTTTACTTTTCTTGTACTATTTATTGTAAGTGACTCCTTGCCACTTTTCATATATAAGGGTGATAGTCACAAAAATGCTTATAGTATACTTAGTAGACTAATCATCATATCTTTATACCCGAAGTTATAAGCTATTAAGTTGTT 3002 34.61 MEGGGSSRSNNKASNHKDSNGLIDVLFSWDFKNVFNQNFYKLKVGKIPKSFESEEQYKGSYLFPLLEETRAELCCSLKTIHKAPFSQVVSIEHSNKKKGKTMFSVNVSTWINTNKKGHQPYKALPGDIFVILDIDPQTISSDYLESSSELNWAFAWLGQANDNNTPSNLKLHISNNMDQVDVHKSTTLFIVFLMNVTTNLRIWKALQGSTDGGIIKHILGTTSTGNQTCKQCNQNGEDSTQNFPTLCLSSLNESQKVAIESCIKNVICQHKPSIELIWGPPGTGKTKTTSILLWKILRMRHQIRTLACAPTNIAITNLASQVVKLLKHDSLSKNDFFCPLGELLLFGNKDRLKFDSQLEDIYLDHRVEKLFKCLGQNGLKFQITSMIGILQENKPSKMKRMFKSIGSSILECVNILVTHIPKQVIMEHNLEKMEILVELIGCIGTLLRKGYDDDKVRESLVDLKCHCLLVLRTLLVSLDEIEVPSKVSKNSIEKFCFQQASLIFTTASNSFKLNSVKKNSLNLLVVDEAAQLKECESLIPLQLQHINHAILIGDEFQLPATIKSKVCEGAKFGRSLFERLSLLGYSKHLLNTQYRMHPLVSCFPNSKFYGNKILDGSIVMDKEYEKHYLPSPLFGPYSFINVCGGQEESNGDGQSKKNMVEVVVVTQIIQMLYKAWCKNKKDLSIGVISPYAAQVSSIQDKFGRKYEKNNEGFRVKVKSIDGFQGGEEDVIIISTVRSNNGKSIGFLSSTQRTNVALTRARFCLWIVGDATTLGKSNSEWRDVVNDAKARKCFFNVEDDKELADGMRMIKTWQISDIKEEILKLDNIYNNDHRGV 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8534536 8544312 - XM_039035866.1 Bhi07g00157 38546

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00157 835 Pfam AAA domain 573 770 IPR041679 -
Bhi07g00157 835 PANTHER DNA2/NAM7 HELICASE FAMILY 13 808 IPR045055 -
Bhi07g00157 835 CDD SF1_C_Upf1 596 788 IPR041679 -
Bhi07g00157 835 Gene3D - 173 593 IPR027417 -
Bhi07g00157 835 PANTHER OS04G0582700 PROTEIN 13 808 - -
Bhi07g00157 835 Pfam Domain of unknown function (DUF6469) 84 207 IPR045529 -
Bhi07g00157 835 Pfam AAA domain 251 565 IPR041677 GO:0004386
Bhi07g00157 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 784 IPR027417 -
Bhi07g00157 835 Gene3D - 595 807 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00157 - - - cpep:111781341 1227.62
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00157 Bhi-Chr7:8534536 Bhi09g02618 Bhi-Chr9:70658235 4.22E-53 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1083 . . . . . . . . . . . . . . . . . Bhi07g00157 . . Lac13g1696 . . . . . . . . . . Cone13ag0671 Cone19ag0665 . . . . Chy10g00088 Cme10g01138 . . Bda07g01445 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00953 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008680 0 1 1 0 0 1 2 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 3 4 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g00157 Bhi_Chr07 FPKM 2.98307 3.191912 1.151733 1.297425 2.689658 2.786121 2.570385 1.16642 1.088062 1.129632