Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00165 ATGACAAGGAAGAAAGTGAAACTGGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGCGAGGGCTTATGAAGAAAGTTAGTGAATTGAGCACTCTGTGTGGGATTGAGGCATGTGCAATCATCTTTGGTCCTTATGATTCTCAGCCTGAGCTCTGGCCTTCGTCCAGTGGAGTCGAACACATTCTCTCTAGATTCAAGAAGATGCCTGAGATGGAACAGAGCAAGAATATGGTCAACCAAGAGAAATTTTTACGACAGAGGATTGCAAAAACAAACGAGCAATTGAAGAAGATGAGAAAGGACAACCGAGAGAAAGAGATCACAAGACTCATGTTTCAAAGCCTCACCGCTGCAAAAGGGTTGCATGGCCTCAACATGCTTGATTTGAATGACCTCGGTTGGGTCATCGACCAAAAGCTTAAAGACATTGCTATACGCATTGAGTCTCTTAAAAAGCCATCCATGCAGCTTCAGCTTCGGTCTCAGCCTCAGCCTCCGCCTCCATCTCAACCGTCACAGACTCAGCCGCAAAGCGCTGCGTGGCTGATGGAGCTTGAGAGCCCTCAGGATCAAATGCGGTTTGTAGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACTACGATAATGCAATGTGGTCCAATGCCTTTTTCCCTTAA 684 45.47 MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFGPYDSQPELWPSSSGVEHILSRFKKMPEMEQSKNMVNQEKFLRQRIAKTNEQLKKMRKDNREKEITRLMFQSLTAAKGLHGLNMLDLNDLGWVIDQKLKDIAIRIESLKKPSMQLQLRSQPQPPPPSQPSQTQPQSAAWLMELESPQDQMRFVGDDMLLPFGDQTYNYDNAMWSNAFFP 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9031156 9031929 + XM_039035588.1 Bhi07g00165 38554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00165 227 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 1 194 - -
Bhi07g00165 227 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Bhi07g00165 227 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi07g00165 227 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi07g00165 227 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi07g00165 227 Gene3D - 13 117 IPR036879 GO:0003677|GO:0046983
Bhi07g00165 227 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 194 - -
Bhi07g00165 227 MobiDBLite consensus disorder prediction 161 183 - -
Bhi07g00165 227 ProSiteProfiles MADS-box domain profile. 1 49 IPR002100 GO:0003677|GO:0046983
Bhi07g00165 227 CDD MADS_SRF_like 2 85 IPR033897 GO:0000981|GO:0000987|GO:0045944
Bhi07g00165 227 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi07g00165 227 Coils Coil 87 114 - -
Bhi07g00165 227 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 51 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00165 Bhi-Chr7:9031156 Bhi08g00789 Bhi-Chr8:26714182 1.28E-70 dispersed
Bhi07g00164 Bhi-Chr7:9012917 Bhi07g00165 Bhi-Chr7:9031156 5.34E-135 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1469 PF00319 SRF-TF 2.00E-17 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00165 - - csv:101203059 369.777