Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00288 TCTCTCTCTTTTGCCTCTCTTTGTGTTTGCATTTTCTACTTTACCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCAAATTTTACAAATAAAAAACATCTTCTTCTTTCTTCTTCTTGGTTTCAATTTCTATAGCTTCACCAAAGCTCCCATGGCAATTTTACCCACCACCTCTTCAAGATTGGACCTCTCCATCTCTGTGCCAGGCTTCAATTCATTCTCATCACCACTCCCTCCATCTGTCACGAGAGATTTGGACATGAACAAAGCTCCAGATGAAGAGGAATGGATGATGGGAAGTATGGAGGAAGATGAAGAAAATAACAATGGAAGCATTAACCCAAGGAAGAAGTTGCGTTTAACAAAGGAACAATCTCATCTTCTTGAACAAAGCTTTAGACAAAACCATACCTTAAACCCAAAACAGAAGGAGACATTGGCAGAAGTTTTGAAATTGAAGCCAAGGCAGGTTGAAGTTTGGTTTCAGAATCGAAGGGCCAGGAGCAAGTTAAAGCAAACGGAGATGGAATGTGAGTATCTAAAGAGATGGTTCGGGCTATTGACAGAACAAAACAAGAGACTACAGAAGGAAGTGGAGGAGCTAAGGGCAATGAAGGTGGCGCCGCCGACGGTGATTTCGCCGCACAGCTGCGAGCCGCTGCCGGCGTCGAATCTCACTATGTGTCCACGCTGCGAGCGCGTGACAACCACTGCCCTCGACAAGACCCGCATTGTCGTTTAAGTTGGTCGGTCGCTGCTCCCCTGTTTTTTTTTTTCTCCACTCATTCGGAATCATCACTCCATCTAATTAATCAAAATCTGCCTCTTTTTTTTTTTTTTTTTTTTTT 850 43.65 MAILPTTSSRLDLSISVPGFNSFSSPLPPSVTRDLDMNKAPDEEEWMMGSMEEDEENNNGSINPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKRLQKEVEELRAMKVAPPTVISPHSCEPLPASNLTMCPRCERVTTTALDKTRIVV 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12969474 12975709 - XM_039037137.1 Bhi07g00288 38677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00288 196 PANTHER - 1 191 - -
Bhi07g00288 196 Gene3D - 58 128 - -
Bhi07g00288 196 Pfam Homeodomain 65 119 IPR001356 GO:0003677
Bhi07g00288 196 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Bhi07g00288 196 Coils Coil 134 154 - -
Bhi07g00288 196 SMART halz 121 164 IPR003106 GO:0006355|GO:0043565
Bhi07g00288 196 CDD homeodomain 64 122 IPR001356 GO:0003677
Bhi07g00288 196 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Bhi07g00288 196 Pfam Homeobox associated leucine zipper 121 155 IPR003106 GO:0006355|GO:0043565
Bhi07g00288 196 SMART HOX_1 63 125 IPR001356 GO:0003677
Bhi07g00288 196 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17 1 191 - -
Bhi07g00288 196 SUPERFAMILY Homeodomain-like 49 122 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00288 Bhi-Chr7:12969474 Bhi12g00871 Bhi-Chr12:26344338 7.73E-77 dispersed
Bhi07g00288 Bhi-Chr7:12969474 Bhi03g01084 Bhi-Chr3:22004589 3.75E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1479 PF00046 Homeodomain 1.10E-16 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00288 K09338 - csv:101222713 374.4