Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00298 ACCCTCGAATCTCATGCCTCAAATTTGAACCTTCTCACTTTGTTCCTCAATTCTCACGCACTCTCAGGTTTCAGCTACCCTCTTCAATCTTCATTTCACCCTTCACCACAATCTTTCTCCCTCTAACATTACACAACCCTCAATCGCACACCCCAAGATTCTCATTCGCCTGCTTCTAGGTTCGTTCGCAATTCATTTTGACATGCGGTTGTATTACGGAGCCAAAGAGATCCTAAAGATTCAAAAATTTCGAAGAATTGTGTCCTATACTGGATTCTATCTTTTCGTTTCCGTTTTGAGCTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGAGATCAATTTTATGCTTCTTACCCTGCTGGAACAGAGCTCTTGACAGACACTACGAAGTTGTACAAAGCTGCTCTTGGGAATTGCTTTGAAATAGAGGAATGGGGTCCAATTGAATTCTACATCATGTCTAAACATTTTGAACGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAGAAAAACATCAAATCAACCAACGACCAAAGAGCTTGAACTTGTTTACTAGTATGTGCATGAGACTACTCACTTCAAAGCTTAAATTCTACTATTTTGAATTTTAAGTATCCAGTTTCTAGATGACGACTAAGCATAGCCCAGTTAGTTAGGTCACTGATAACCTCATTTATGCAAGTCATAGGTTTAAATCTTCACCACTTTATTTGAATTTTATTATTCTTTAAATAATATATGCATTGATTGCCCTTCTCTTATACCAAAAATTTGTAATTGACATGAAACAAGATTGATGTCCACCTCTTCAATTGTTCCTATTTTCGATATATTGTAGGATGCTATGGTTGAATCATAAGTATCTCTCTGGGATCTGTGCTATGTATGCGTGTGTATATTATAAA 969 37.56 MRLYYGAKEILKIQKFRRIVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFYIMSKHFERQGKSPYAYHSQYMAHLLSHGQLDGSG 122
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13234650 13237099 - XM_039037204.1 Bhi07g00298 38687

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00298 122 PANTHER TRANSMEMBRANE PROTEIN 1 122 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00298 - - - csv:101204884 246.514
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00296 Bhi-Chr7:13234650 Bhi07g00298 Bhi-Chr7:13234650 8.16E-89 dispersed
Bhi07g00297 Bhi-Chr7:13234650 Bhi07g00298 Bhi-Chr7:13234650 8.16E-89 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g423 . . . . . . . . . . . Cma04g00044 . . . . . Bhi07g00298 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004401 1 5 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 0 1 1 1 5 3 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g00298 Bhi_Chr07 FPKM 731.110474 801.564148 647.098328 621.508179 314.606659 396.177643 287.389557 358.423767 355.418182 305.699158
Bhi07g00298 Bhi_Chr09 FPKM 54.287086 60.979706 83.20166 80.827072 60.153088 65.696815 54.500275 59.36557 54.596596 51.368282