Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00339 CTATTTCCAACTGTTATCCTCTTTGTTTTCTTCTCCTTCATTTTTCTATTGGTTCACACCCTCTGATTCTCTCTCTCCAAAAACAATTTCTTCCATTTCTTCCAATTCCAATCTTTTCAAGATAAACCCAGTTACAGAATCTCAACTGAAACCCAATTACATTGTGTAATCGCCGCCGGAATAATGGCCGGAATTGTCGCCGGCGACAGCGACAGTGCTCCGGCTTTAGCTCTACTCGACTTTGTTCGCGATGTTGTTCGAATGTCGGTGGGGACGAACACTGGCGAGGTTTTCAAGAAGGATTGCACCGATCTGGTTCGTCGGATCGTGCTTTTGACGCATTTGTTTGAGGAAATAAGGGACTTCAATGGCGTCCAATTTCGACCTGTTGATGCATCTCCTTCGTCTTCTTCTTCTGGTGGTGCCGTTACTGTTAGGGATTCGTCTCAGTTTCCATGGCTTTGTGATTTAGTAGCGGCATTAAAGGATACTAAACGCCTCGTCTTCATAGCTTCGACTTTCCGGTCTTGCCGTTCTTCTTCTGAAGAAGTTGCCAAGAAGATACTGTTTCAATTCCAATGTGTGACATGGAAGTTAGAGAAGGCATTAGGCAATCTTCCTTATGATCGCCTTGATATATCAGAGGAAGTTCAAGAACAGGTTGAATTAGTGAGAGCTCAATTGAGAAGAGCAGCAGAAAAATATGGGTCTTTGACTGCAATTCCACCATCTGTTGTTCAATCTCAGTTGTTGAAGAAAAATGTGGATCTGTTAAATTTGAACAACCGGGTTGATAACTTTGATGTTGAGGAGAATGGTATTGTTGATCATGAGATTACAGTGAAATTTGATGCATTTCCAAATTGTAGAGGGTTAATGAATGGTGGTGTGGATCAATTGACTTTTAAAGGACCTGAGAAACTTCCATCCTCTTCAGAGGCTTGTTCTGATGGACAGGATGACTCTGCTAGAAAGAGTGGAGATCAGGGGAAGAACCCAGATGGAGTTTCAATACCTGATGATTTTTTATGCCCCATATCATTGGAAATAATGAGAGATCCTGTTATTGTCTCCACAGGCCAGACTTATGAGAGATCTTATGTACAAAGATGGATAGATTGTGGGAATACTACTTGTCCCAAAACTCAGCAGAAGCTCCAGAATTTGACTCTCACCCCAAATTACGTGTTGCGAAGTCTCATTAGTCAATGGTGTGTGAATCACAATATCGAGCAACCTACGGGATTAACCAATGGGAAGATCAAAAAGTGCGACGGATCATACCGTGATGTGTGCGAGGAGATGGCAGCCATTGAAACTCTGGTCCGCAAGCTAACTAGCCATGCAATCGAAGAGCAGAGAGCATCTGTGACCGAACTTCGATCTCTATCGAAAAGAAGCACGGATAATAGAATACTGATAGCTGAAGCAGGAGCAATTCCTGCATTGGTTAATCTATTAACTTCTGATGATGTTTTAATACAAGAAAATGCAGTTACTTCCATTCTAAACCTTTCAATATATGAGAACAACAAGGGATTAATTATGCTTGCTGGTGCAGTACCTTCCATTGTTCAAGTTCTTAGAGTTGGAAGTATGGAAGCAAGAGAAAATGCAGCAGCAACACTTTTTAGCTTGTCTCTTGCTGATGAAAATAGGATAATCATTGGTGCTTCTGGTGCTATTCCAGCTCTTGTGGATTTACTTGAAAATGGAAGCTCAAGAGGAAAGAAGGATGCTGCAACAGCACTATTTAATTTGTGCATTTATCAGGGGAACAAGGGAAGAGCTGTGAGGGCAGGGATCATTCCAGCTCTATTAAAGATGCTTACGGACTCCGTTAACAACATGATCGACGAAGCTCTCACAATAATGTCGGTCCTGGCCAGCCATCAAGAAGCAAAAGTAGCCATGGTGAAAGCCAGTACCATTCCTGTTCTAATAGACCTTCTAAGGACCGGATTGTCTCGCAACAAAGAAAATGCTGCTGCTATTTTGCTTGCTTTATGTAAGCGAGATACCGAAAATCTTTCTTGTATAAGTAGGCTCGGTGCTGTGATTCCACTGACGGAGCTTGCCAAGAGTGGCACGGAGAGAGCGAAAAGGAAGGCTACTTCATTGTTGGAGCATCTTCGAAAACTGCAGCAGCTATAGAAAAGGTGTGGATTTGTCAACAATCATTTTCCATATTTCTTTTTCTTCCAACTTTTTTGAGTACTTTTGACAATTAATTTTTCAATTCATTCTCTTTGCTTGTGATAACAAAGAATTAGGGATGGATGGCTAATGAAGGCCACACTCCTTGAATCTGTGTACTTCATTCCTTCATTATATTGTACAAGTGTGTATAAATTCATTTACTGACTTTCTTAACAAATTTTTCTGTTATAACCAAAAAGAAAGTACTGTTTGGGAATA 2418 41.11 MAGIVAGDSDSAPALALLDFVRDVVRMSVGTNTGEVFKKDCTDLVRRIVLLTHLFEEIRDFNGVQFRPVDASPSSSSSGGAVTVRDSSQFPWLCDLVAALKDTKRLVFIASTFRSCRSSSEEVAKKILFQFQCVTWKLEKALGNLPYDRLDISEEVQEQVELVRAQLRRAAEKYGSLTAIPPSVVQSQLLKKNVDLLNLNNRVDNFDVEENGIVDHEITVKFDAFPNCRGLMNGGVDQLTFKGPEKLPSSSEACSDGQDDSARKSGDQGKNPDGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLISQWCVNHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHAIEEQRASVTELRSLSKRSTDNRILIAEAGAIPALVNLLTSDDVLIQENAVTSILNLSIYENNKGLIMLAGAVPSIVQVLRVGSMEARENAAATLFSLSLADENRIIIGASGAIPALVDLLENGSSRGKKDAATALFNLCIYQGNKGRAVRAGIIPALLKMLTDSVNNMIDEALTIMSVLASHQEAKVAMVKASTIPVLIDLLRTGLSRNKENAAAILLALCKRDTENLSCISRLGAVIPLTELAKSGTERAKRKATSLLEHLRKLQQL 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14833207 14837333 + XM_039037279.1 Bhi07g00339 38728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00339 656 Gene3D - 454 577 IPR011989 -
Bhi07g00339 656 Gene3D - 578 651 IPR011989 -
Bhi07g00339 656 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 458 500 IPR000225 GO:0005515
Bhi07g00339 656 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 11 20 653 - -
Bhi07g00339 656 Coils Coil 636 656 - -
Bhi07g00339 656 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 350 IPR013083 -
Bhi07g00339 656 Gene3D - 359 453 IPR011989 -
Bhi07g00339 656 SMART arm_5 406 446 IPR000225 GO:0005515
Bhi07g00339 656 SMART arm_5 570 610 IPR000225 GO:0005515
Bhi07g00339 656 SMART arm_5 488 528 IPR000225 GO:0005515
Bhi07g00339 656 SMART arm_5 612 652 IPR000225 GO:0005515
Bhi07g00339 656 SMART arm_5 447 487 IPR000225 GO:0005515
Bhi07g00339 656 SMART arm_5 529 569 IPR000225 GO:0005515
Bhi07g00339 656 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 540 582 IPR000225 GO:0005515
Bhi07g00339 656 MobiDBLite consensus disorder prediction 240 277 - -
Bhi07g00339 656 SUPERFAMILY RING/U-box 266 350 - -
Bhi07g00339 656 Pfam Armadillo/beta-catenin-like repeat 489 527 IPR000225 GO:0005515
Bhi07g00339 656 Pfam Armadillo/beta-catenin-like repeat 407 445 IPR000225 GO:0005515
Bhi07g00339 656 SUPERFAMILY ARM repeat 367 650 IPR016024 -
Bhi07g00339 656 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 499 541 IPR000225 GO:0005515
Bhi07g00339 656 PANTHER U BOX DOMAIN-CONTAINING 20 653 - -
Bhi07g00339 656 Pfam U-box domain 277 348 IPR003613 GO:0004842|GO:0016567
Bhi07g00339 656 ProSiteProfiles U-box domain profile. 276 350 IPR003613 GO:0004842|GO:0016567
Bhi07g00339 656 Coils Coil 153 173 - -
Bhi07g00339 656 CDD RING-Ubox_PUB 281 323 IPR045210 -
Bhi07g00339 656 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 417 459 IPR000225 GO:0005515
Bhi07g00339 656 SMART Ubox_2 280 343 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00339 Bhi-Chr7:14833207 Bhi12g00879 Bhi-Chr12:26656113 0 dispersed
Bhi08g01455 Bhi-Chr8:42703895 Bhi07g00339 Bhi-Chr7:14833207 2.49E-09 dispersed
Bhi07g00339 Bhi-Chr7:14833207 Bhi08g00619 Bhi-Chr8:20447784 7.77E-168 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00339 - - csv:101221534 1154.04