Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00357 CATTCCCCCTCTTCTTATCTTCCCCCATCTCTTAATTCTATTCACTTCCAACAAAACAAGCCTTTATTTTTTTCCCTTTCTTTCTTTCTTTCAATTCCTCAAAGCTCAACAATGGCATCCACAACACTGAGCACTTCAATACCAACAAGAAGAGATTCATTTTCAAATTTGATTCCAAACAAACCCTTAAATCCCAAAGTGTTCAATTTCGCCTTTCTGAAACGTGCTGCCCCACGAGGGGTGGTGGCAACGTGGAGGACGGCGGAGCACGGTGGAGCATTGGTAGCGGAGGAGGAGGAGGATGAGGAGATGGGGAGGATCCGGAGGCTGCAGAACGGGTCGGACGTGAGAGGGGTGGCGATCGAGGGGGAGAAGGGGAGGGCGGTGGATTTGACGGCGGCTGCGGTGGAGGCGATAGCGGAGAGTTTTGCCGAGTGGATGATCGAGGGGATGGAATCAGGGCGGCGTGTGAGCATTTCGGTGGGGAGAGACCCGAGAATTTCCGGCGGTGCTTTGAGTGTTGCAGTGTTCGCCGGAGTTAGTAGGGCGGGGTGTTTGGTGTTTGATATGGGACTTGCCACCACGCCGGCGTGTTTCATGAGCACCGTTTTGCCTCCTTTTTCATATGATGCTTCTATTATGTTAACAGCATCTCACTTACCATATACACGAAATGGGATGAAGTTCTTCACGAAGAGAGGAGGGCTAAGCTCGCCGGAGGTAGAGGAGATATGCGACAGAGCCGCCGTGAAGTACGCCAACAGAGTGGTCAAAGTCTCCACTCTTCTCCGAACGCCACCGTCGAAGGTGGATTTCATGGCGGCTTATTCACAGCATCTCAGAGATATCATTAAGCAAAGAATAAATCATCCTTTGCATTATGATACTCCTCTCAAAGGATTCCAGATAATAGTAAACGCGGGTAATGGATCCGGAGGCTTCTTCACATGGGATGTGTTGGACAAGCTCGGCGCAGACACTTTTGGCTCTCTCCATCTCAACCCAGACGGCATGTTCCCCAACCACATCCCTAATCCAGAGGACAAAACCGCCATGTCGCTCACCCGAGCCGCCGTCCTCGAACACGGAGCTGACCTCGGTGTCGTCTTCGACACCGACGTTGACCGTAGTGGTGTCGTCGATCACGAGGGCAACCCAATCAATGGCGACAAGCTCATTGCCCTAATGTCAGCCATCATCCTCCGAGAGCACCCTGGCTCGACCGTCGTTACCGACGCTCGTACCAGCGTTGCCCTCACAAAGTTCATCACAAACCGAGGCGGGCAGCATTGCCTCTACCGCGTAGGGTATCGGAATGTCATCGACAAAGGGATTCAACTCGATGCCGACGGAATCGAGACGCATCTCATGATGGAGACGTCGGGGCATGGTGCACTTAAGGAGAATTATTTTTTGGATGATGGAGCTTATATGGTAGTGAAAATTATTATTGAAATGGTGAGAATGAAGCTAGAGGGATCAAATGAAGGAATTGGGAGTCTTATAAAAGATCTTGAAGAGCCATTGGAGTCTGTGGAATTGAGATTGAATGTGATTTCTGAGCCAAGTTTTGCAAAAGAGAAGGCTGTTGAGATCATAGAGACATTCAGAAACTTTGTTGAGGAAGGGAAGCTTGAGGGATGGGAATTGGACTCATGTGGAGATTGTTGGGTGCATGAAGGCTGCTTGGTGGACCTAAATGATAATCCCAAGCCAATTGATGCACAAATGTACAGGATTAAAGTATATGATAAGGAAAATGGAGAGGTTGGTTGGGTACACTTAAGACAAAGCATTCACAATCCAAATCTTGTTTTGAATATGCAATCATCTCTATCTGGAGGCTGCCTCCAAATCACTAGAGACTTCAGAGATAAATTTTTGGTGGCAAGTGGATGTGATCGTTTCCTTGATGTGGATCAGGTGGAGAAGTTCTTAAGCACTAGACTTGCAAGATAACGAGATCAATGGAAATAATTGATTTTGAAGTTAAATTAATATAAAATATGGAAAGATTATTTTGAAAAAAAATATATAGAATGATTAAAAATGTACAGTGGCCAAATATATATGTTATATATAAAATATATACACGTTTGCTTCACATATAATTAATTAATTGGATGGAAAGTGTATCTTATAATACTAGTATTTATGCATGCGGATTGTATGTGGTA 2177 46.07 MASTTLSTSIPTRRDSFSNLIPNKPLNPKVFNFAFLKRAAPRGVVATWRTAEHGGALVAEEEEDEEMGRIRRLQNGSDVRGVAIEGEKGRAVDLTAAAVEAIAESFAEWMIEGMESGRRVSISVGRDPRISGGALSVAVFAGVSRAGCLVFDMGLATTPACFMSTVLPPFSYDASIMLTASHLPYTRNGMKFFTKRGGLSSPEVEEICDRAAVKYANRVVKVSTLLRTPPSKVDFMAAYSQHLRDIIKQRINHPLHYDTPLKGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLNPDGMFPNHIPNPEDKTAMSLTRAAVLEHGADLGVVFDTDVDRSGVVDHEGNPINGDKLIALMSAIILREHPGSTVVTDARTSVALTKFITNRGGQHCLYRVGYRNVIDKGIQLDADGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIEMVRMKLEGSNEGIGSLIKDLEEPLESVELRLNVISEPSFAKEKAVEIIETFRNFVEEGKLEGWELDSCGDCWVHEGCLVDLNDNPKPIDAQMYRIKVYDKENGEVGWVHLRQSIHNPNLVLNMQSSLSGGCLQITRDFRDKFLVASGCDRFLDVDQVEKFLSTRLAR 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15956176 15968418 + XM_039036756.1 Bhi07g00357 38746

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00357 615 SUPERFAMILY Phosphoglucomutase, first 3 domains 77 247 IPR016055 GO:0005975|GO:0016868
Bhi07g00357 615 Gene3D - 265 343 - -
Bhi07g00357 615 Gene3D - 74 222 - -
Bhi07g00357 615 Gene3D - 344 467 - -
Bhi07g00357 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 174 188 IPR005841 GO:0005975|GO:0016868
Bhi07g00357 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 263 282 IPR005841 GO:0005975|GO:0016868
Bhi07g00357 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 298 311 IPR005841 GO:0005975|GO:0016868
Bhi07g00357 615 PRINTS Phosphoglucomutase/phosphomannomutase family signature 327 342 IPR005841 GO:0005975|GO:0016868
Bhi07g00357 615 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 351 451 IPR005846 GO:0005975|GO:0016868
Bhi07g00357 615 SUPERFAMILY Phosphoglucomutase, first 3 domains 351 452 IPR016055 GO:0005975|GO:0016868
Bhi07g00357 615 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 238 347 IPR005845 GO:0005975
Bhi07g00357 615 PANTHER PHOSPHOHEXOSE MUTASE 32 610 - -
Bhi07g00357 615 PANTHER OS06G0476200 PROTEIN 32 610 - -
Bhi07g00357 615 SUPERFAMILY Phosphoglucomutase, first 3 domains 238 349 IPR016055 GO:0005975|GO:0016868
Bhi07g00357 615 CDD PMM_PGM 73 590 - -
Bhi07g00357 615 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 72 213 IPR005844 GO:0005975|GO:0016868
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00357 - - - csv:101207539 1115.14
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01375 Bhi-Chr4:34552658 Bhi07g00357 Bhi-Chr7:15956176 1.41E-128 dispersed
Bhi04g01376 Bhi-Chr4:34552658 Bhi07g00357 Bhi-Chr7:15956176 1.02E-126 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g450 . . . . . . Bma14g01883 . . . . . . . Sed01g2847 . . Bhi07g00357 Tan04g1549 Cmetu10g0494 . Hepe01g0551 . . Cla07g00577 Cam07g0604 Cec07g0674 Cco07g0644 Clacu07g0608 Cmu07g0641 Cre07g0980 Cone13ag0751 . . . Lsi04g01125 . Chy10g00233 Cme10g01586 . Blo11g00979 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 4 2 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g00357 Bhi_Chr07 FPKM 1.3552 1.495152 1.80189 1.6178 3.405028 3.51038 3.695882 2.740056 3.00158 2.798462