Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00392 ATGGGCGGCTCGTGACAGTAGGCGGATGGAATCAGTTCCAATAACGTGGAAACTCCCCTAGCTACCACGTCAACGCCTTTTCTCAGCCGGTTCTTCCTATTTCCCCTCCCTGTTTGACAGTTACCGTCGCCACCGGCCAATGCTCATTCCTACTGCCGTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGCTTCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCACTCGGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAGTTTGCAGGCAGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCATCAATCGATTATGCCGAAGAGTCGCCCCTTTGTACCACGCTTTGTAAGGATGGGTTTAAAATTCGGACAGTTGAGCATTTGCTTTCTGCCATGGAGGCCATGGGGGTCGACAATTGTAGGATCGAGATAGCGAATGAAGATGATGAAGATAGTGAAGTCGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGGGGAGATTGGTCTTAAGTTGGCTATAGATCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGATTGTTATCTTGTTGCTTTTCCAGCCTCGGCAGTTCGTATAACGTATGGAATTGACTTTCCTCAGGTAGAGCAAATGCAGAATATGGGACTCATAAAAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTTATTGGCGATCTCTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGCTTACAAGGGTGGTCATGCTATGCACACCAATTTTGTTCGCCACTTATCGGAAAACATTCGAGTGGAGAAGTAGCTGTCTTCCCTTGCAGAAGTATAAAAAGATGCTACAGTTGCGGAGTCCACAACTTTCTTACTTTCTTCTTCCTTCATCGGCTGACACCCAAATGCGTGCTCATCGAGGAGGATATCATCGGCATGTGAAGAACAGTACACCTCAAAAATCGTTTCTTGATGGTAGTGTTATTGATCACTTATTTGACAGAGTCGATACAAATTGTTTAGAGAATGACAGTTAGATTGACAAGGCTTGGTCCTTTTTAGGTGATAGCTGCTAAAACTTCACTCCAGGTTATTAATGTTAGATGCAAATTGTATTCTAGTCAGTAGGAAGGATTCATGGGCGTCTAATTTGAGTTTGACCATCCACTCTGGAAGTTTTCTTGAAATCATAATCATTCAAATTGACAATCGATCTTAAA 1397 44.81 MLIPTAVNALKSSRSISWSPTGRLQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLCKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDEDSEVEVPIFDGSAGKWVDAIGEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVEQMQNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDFIGDLSLFAQLGSQGIPVAHIVAYKGGHAMHTNFVRHLSENIRVEK 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17529934 17572978 + XM_039036121.1 Bhi07g00392 38781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00392 283 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 143 IPR020568 -
Bhi07g00392 283 Gene3D lpxc deacetylase, domain 2 191 283 IPR011334 GO:0008759|GO:0009245
Bhi07g00392 283 Gene3D lpxc deacetylase, domain 1 23 148 IPR015870 GO:0008759|GO:0009245
Bhi07g00392 283 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 192 280 IPR004463 GO:0008759|GO:0009245
Bhi07g00392 283 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 193 IPR004463 GO:0008759|GO:0009245
Bhi07g00392 283 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 277 IPR020568 -
Bhi07g00392 283 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 192 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00392 Bhi-Chr7:17529934 Bhi07g00394 Bhi-Chr7:17529935 0 dispersed
Bhi07g00392 Bhi-Chr7:17529934 Bhi07g00393 Bhi-Chr7:17529935 8.18E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00392 K02535 - csv:101205101 507.679