Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00393 TGGGCGGCTCGTGACAGTAGGCGGATGGAATCAGTTCCAATAACGTGGAAACTCCCCTAGCTACCACGTCAACGCCTTTTCTCAGCCGGTTCTTCCTATTTCCCCTCCCTGTTTGACAGTTACCGTCGCCACCGGCCAATGCTCATTCCTACTGCCGTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGCTTCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCACTCGGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAGTTTGCAGGCAGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCATCAATCGATTATGCCGAAGAGTCGCCCCTTTGTACCACGCTTTGTAAGGATGGGTTTAAAATTCGGACAGTTGAGCATTTGCTTTCTGCCATGGAGGCCATGGGGGTCGACAATTGTAGGATCGAGATAGCGAATGAAGATGATGAAGATAGTGAAGTCGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGGGGAGATTGGTCTTAAGTTGGCTATAGATCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGATTGTTATCTTGTTGCTTTTCCAGCCTCGGCAGTTCGTATAACGTATGGAATTGACTTTCCTCAGGTGCCCAACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCCCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAGCAAATGCAGAATATGGGACTCATAAAAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGGAGTCTTGCTTGGAAAAAAATCTGTCTCTTTGCATGGACGCTTCTTCTTTGGCCAGATCGTTTTGTGTCTGCTTGATTAAAGGCCTCCTCTTTTGGTGTTCTCTTCTCAAACCTTTTGCTGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTTATTGGCGATCTCTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGCTTAC 1144 47.2 MLIPTAVNALKSSRSISWSPTGRLQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLCKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDEDSEVEVPIFDGSAGKWVDAIGEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPNIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMQNMGLIKGGSIENALVCRSLAWKKICLFAWTLLLWPDRFVSA 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17529935 17567814 + XM_039036122.1 Bhi07g00393 38782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00393 272 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 251 IPR004463 GO:0008759|GO:0009245
Bhi07g00393 272 Gene3D lpxc deacetylase, domain 1 23 148 IPR015870 GO:0008759|GO:0009245
Bhi07g00393 272 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 249 IPR020568 -
Bhi07g00393 272 Gene3D lpxc deacetylase, domain 2 160 256 IPR011334 GO:0008759|GO:0009245
Bhi07g00393 272 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 250 IPR004463 GO:0008759|GO:0009245
Bhi07g00393 272 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 143 IPR020568 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00393 Bhi-Chr7:17529935 Bhi07g00395 Bhi-Chr7:17529935 0 dispersed
Bhi07g00392 Bhi-Chr7:17529934 Bhi07g00393 Bhi-Chr7:17529935 8.18E-152 tandem
Bhi07g00393 Bhi-Chr7:17529935 Bhi07g00394 Bhi-Chr7:17529935 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00393 K02535 - csv:101205101 465.692