Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00396 TGGGCGGCTCGTGACAGTAGGCGGATGGAATCAGTTCCAATAACGTGGAAACTCCCCTAGCTACCACGTCAACGCCTTTTCTCAGCCGGTTCTTCCTATTTCCCCTCCCTGTTTGACAGTTACCGTCGCCACCGGCCAATGCTCATTCCTACTGCCGTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGCTTCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCACTCGGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAGTTTGCAGGCAGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCATCAATCGATTATGCCGAAGAGTCGCCCCTTTGTACCACGCTTTGTAAGGATGGGTTTAAAATTCGGACAGTTGAGCATTTGCTTTCTGCCATGGAGGCCATGGGGGTCGACAATTGTAGGATCGAGATAGCGAATGAAGATGATGAAGATAGTGAAGTCGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGGGGAGATTGGTCTTAAGTTGGCTATAGATCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGATTGTTATCTTGTTGCTTTTCCAGCCTCGGCAGTTCGTATAACGTATGGAATTGACTTTCCTCAGGTGCCCAACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCCCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAGCAAATGCAGAATATGGGACTCATAAAAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTTATTGGCGATCTCTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGCTTACAAGGGTGGTCATGCTATGCACACCAATTTTGTTCGCCACTTATCGGAAAACATTCGAGTGGAGAAGTAGCTGTCTTCCCTTGCAGAAGTATAAAAAGATGCTACAGTTGCGGAGTCCACAACTTTCTTACTTTCTTCTTCCTTCATCGGCTGACACCCAAATGCGTGCTCATCGAGGAGGATATCATCGGCATGTGAAGAACAGTACACCTCAAAAATCGTTTCTTGATGGTAGTGTTATTGATCACTTATTTGACAGAGTCGATACAAATTGTTTAGAGAATGACAGTTAGATTGACAAGGCTTGGTCCTTTTTAGGTGATAGCTGCTAAAACTTCACTCCAGGTTATTAATGTTAGATGCAAATTGTATTCTAGTCAGTAGGAAGGATTCATGGGCGTCTAATTTGAGTTTGACCATCCACTCTGGAAGTTTTCTTGAAATCATAATCATTCAAATTGACAATCGATCTTAAA 1498 45.06 MLIPTAVNALKSSRSISWSPTGRLQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLCKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDEDSEVEVPIFDGSAGKWVDAIGEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPNIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMQNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDFIGDLSLFAQLGSQGIPVAHIVAYKGGHAMHTNFVRHLSENIRVEK 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17529935 17572978 + XM_039036116.1 Bhi07g00396 38785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00396 317 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 311 IPR020568 -
Bhi07g00396 317 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 314 IPR004463 GO:0008759|GO:0009245
Bhi07g00396 317 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 310 IPR004463 GO:0008759|GO:0009245
Bhi07g00396 317 Hamap UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 23 314 IPR004463 GO:0008759|GO:0009245
Bhi07g00396 317 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 25 313 IPR004463 GO:0008759|GO:0009245
Bhi07g00396 317 Gene3D lpxc deacetylase, domain 2 160 317 IPR011334 GO:0008759|GO:0009245
Bhi07g00396 317 Gene3D lpxc deacetylase, domain 1 23 148 IPR015870 GO:0008759|GO:0009245
Bhi07g00396 317 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 143 IPR020568 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00394 Bhi-Chr7:17529935 Bhi07g00396 Bhi-Chr7:17529935 0 dispersed
Bhi07g00396 Bhi-Chr7:17529935 Bhi07g00398 Bhi-Chr7:17529935 0 dispersed
Bhi07g00395 Bhi-Chr7:17529935 Bhi07g00396 Bhi-Chr7:17529935 0 tandem
Bhi07g00396 Bhi-Chr7:17529935 Bhi07g00397 Bhi-Chr7:17529935 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00396 K02535 - csv:101205101 587.415