Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00398 TGGGCGGCTCGTGACAGTAGGCGGATGGAATCAGTTCCAATAACGTGGAAACTCCCCTAGCTACCACGTCAACGCCTTTTCTCAGCCGGTTCTTCCTATTTCCCCTCCCTGTTTGACAGTTACCGTCGCCACCGGCCAATGCTCATTCCTACTGCCGTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGCTTCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCACTCGGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAGTTTGCAGGCAGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCATCAATCGATTATGCCGAAGAGTCGCCCCTTTGTACCACGCTTTGTAAGGATGGGTTTAAAATTCGGACAGTTGAGCATTTGCTTTCTGCCATGGAGGCCATGGGGGTCGACAATTGTAGGATCGAGATAGCGAATGAAGATGATGAAGATAGTGAAGTCGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGGGGAGATTGGTCTTAAGTTGGCTATAGATCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGATTGTTATCTTGTTGCTTTTCCAGCCTCGGCAGTTCGTATAACGTATGGAATTGACTTTCCTCAGGTGCCCAACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCCCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAGCAAATGCAGAATATGGGACTCATAAAAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTTATTGGCGATCTCTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGCTTACAAGGAATTCTCTGCAGGAGTCCACAACTTTCTTACTTTCTTCTTCCTTCATCGGCTGACACCCAAATGCGTGCTCATCGAGGAGGATATCATCGGCATGTGAAGAACAGTACACCTCAAAAATCGTTTCTTGATGGTAGTGTTATTGATCACTTATTTGACAGAGTCGATACAAATTGTTTAGAGAATGACAGTTAGATTGACAAGGCTTGGTCCTTTTTAGGTGATAGCTGCTAAAACTTCACTCCAGGTTATTAATGTTAGATGCAAATTGTATTCTAGTCAGTAGGAAGGATTCATGGGCGTCTAATTTGAGTTTGACCATCCACTCTGGAAGTTTTCTTGAAATCATAATCATTCAAATTGACAATCGATCTTAAA 1403 45.12 MLIPTAVNALKSSRSISWSPTGRLQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLCKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDEDSEVEVPIFDGSAGKWVDAIGEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPNIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMQNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDFIGDLSLFAQLGSQGIPVAHIVAYKEFSAGVHNFLTFFFLHRLTPKCVLIEEDIIGM 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17529935 17572978 + XM_039036123.1 Bhi07g00398 38787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00398 328 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 25 297 IPR004463 GO:0008759|GO:0009245
Bhi07g00398 328 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 297 IPR020568 -
Bhi07g00398 328 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 296 IPR004463 GO:0008759|GO:0009245
Bhi07g00398 328 Gene3D lpxc deacetylase, domain 1 23 148 IPR015870 GO:0008759|GO:0009245
Bhi07g00398 328 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 143 IPR020568 -
Bhi07g00398 328 Gene3D lpxc deacetylase, domain 2 160 310 IPR011334 GO:0008759|GO:0009245
Bhi07g00398 328 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 305 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00396 Bhi-Chr7:17529935 Bhi07g00398 Bhi-Chr7:17529935 0 dispersed
Bhi07g00397 Bhi-Chr7:17529935 Bhi07g00398 Bhi-Chr7:17529935 0 tandem
Bhi07g00398 Bhi-Chr7:17529935 Bhi07g00399 Bhi-Chr7:17529935 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00398 K02535 - csv:101205101 564.303