Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00399 TGGGCGGCTCGTGACAGTAGGCGGATGGAATCAGTTCCAATAACGTGGAAACTCCCCTAGCTACCACGTCAACGCCTTTTCTCAGCCGGTTCTTCCTATTTCCCCTCCCTGTTTGACAGTTACCGTCGCCACCGGCCAATGCTCATTCCTACTGCCGTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGCTTCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCACTCGGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAGTTTGCAGGCAGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCATCAATCGATTATGCCGAAGAGTCGCCCCTTTGTACCACGCTTTGTAAGGATGGGTTTAAAATTCGGACAGTTGAGCATTTGCTTTCTGCCATGGAGGCCATGGGGGTCGACAATTGTAGGATCGAGATAGCGAATGAAGATGATGAAGATAGTGAAGTCGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGGGGAGATTGGTCTTAAGTTGGCTATAGATCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGATTGTTATCTTGTTGCTTTTCCAGCCTCGGCAGTTCGTATAACGTATGGAATTGACTTTCCTCAGGTGCCCAACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCCCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAGCAAATGCAGAATATGGGACTCATAAAAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTTATTGGCGATCTCTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGCTTACAAGGAGTCCACAACTTTCTTACTTTCTTCTTCCTTCATCGGCTGACACCCAAATGCGTGCTCATCGAGGAGGATATCATCGGCATGTGAAGAACAGTACACCTCAAAAATCGTTTCTTGATGGTAGTGTTATTGATCACTTATTTGACAGAGTCGATACAAATTGTTTAGAGAATGACAGTTAGATTGACAAGGCTTGGTCCTTTTTAGGTGATAGCTGCTAAAACTTCACTCCAGGTTATTAATGTTAGATGCAAATTGTATTCTAGTCAGTAGGAAGGATTCATGGGCGTCTAATTTGAGTTTGACCATCCACTCTGGAAGTTTTCTTGAAATCATAATCATTCAAATTGACAATCGATCTTAAA 1390 45.11 MLIPTAVNALKSSRSISWSPTGRLQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLCKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDEDSEVEVPIFDGSAGKWVDAIGEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPNIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMQNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDFIGDLSLFAQLGSQGIPVAHIVAYKESTTFLLSSSFIG 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17529935 17572978 + XM_039036119.1 Bhi07g00399 38788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00399 309 Gene3D lpxc deacetylase, domain 1 23 148 IPR015870 GO:0008759|GO:0009245
Bhi07g00399 309 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 25 299 IPR004463 GO:0008759|GO:0009245
Bhi07g00399 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 298 IPR020568 -
Bhi07g00399 309 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 300 IPR004463 GO:0008759|GO:0009245
Bhi07g00399 309 Gene3D lpxc deacetylase, domain 2 160 303 IPR011334 GO:0008759|GO:0009245
Bhi07g00399 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 143 IPR020568 -
Bhi07g00399 309 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 298 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00397 Bhi-Chr7:17529935 Bhi07g00399 Bhi-Chr7:17529935 0 dispersed
Bhi07g00398 Bhi-Chr7:17529935 Bhi07g00399 Bhi-Chr7:17529935 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00399 K02535 - csv:101205101 561.992