Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00400 ACTCTCTTTCTATCTGTCTCTTTCTCTCTCTAACAGACTTCCCCCACACATACTGACACACCCCTCCCAAATTCCTAGAGAGAGAAAACACTGACCCAGAGAAACCATAGCCCCCATTTCCCTCTTTCTCTCTCTAAATTTCATCTATACCCCTCCTAGAGAGAGAGTGTCTAGCTCTCTTTAACGAACCCAATTCTTCTTTTTCACTCTGTTGCTCTCTTTTTCTCTCTGTATTGCTCTGTTTTTGTGTGTATTGTAGTGATTTTTGTTTTTTTTCTATTGATTTTGTGTTGAATGTGATGTACCCTTTGTGAGATTTGAAGCCCTAGAGTTTGTGGATCGTGGGTTGGAGTTACATTTGAATGTGAAGGCAGAGGGGGAGAGATTTGGGTAGATCAGGTTATGATGGCGGAGATTTCTGGTGATGGAGGTGGTTTTTTGCCGGAGGTTAATAATGGACGTGGGGTGGATTCTCAGGCTACACCGACGCCGATTACGGCACCGAATCCGACGCCGTTGACGGTGTCGGGATCTTTCAAGGAAGGGAAAAGCTCGTCGCGTCGCCGGACGTCCGTTAGGCCGAGTATGGACGCCGACGACTTCTTGAACTTGTTGCACGGTTCGGATCCGGTGAAGGTGGAGCTCAATCGCCTTGAGAATGAAGTGCGAGATAAGGATAGAGAACTCGGGGAAGCTCAGGCGAAGATCAAGGCTTTGAAGTTGTCTGAGCGGCTTAGAGAAAAGGCAGTTGAAGAGCTGACTGAAGAACTATCAAGGGCCGAGGAGAAATTAAAATTGACAGAATCTCTCCTCGAAAGCAAGAATCTTGAAATAAAGAAAATCAATGATGAGAAGAAGGCTTCAATGGCAGCTCAATTTGCTGCTGAAGCCACTCTTAGGAGGGTACATGCTGCTCAAAAGGATGATGACATGCCTCCAATTGAAGCCATTCTTGCACCTTTGGAGGCTGAGCTCAAGCTTGCACGACAAGAGATTGCTAAGCTACAAGATGACAATAAAGCATTGGATCGTCTTACCAAATCAAAGGAAGCAGCTTTGATTGATGCTGAGAGGACTGTTCAAAGTGCCCTGGCCAAGGCCTCTATGGTGGATGATTTACAAAATAAAAATCAGGAGTTAATGAAACAGATTGAGATTTGCCAGGAAGAAAATAAAATCTTGGATAAGATGCACAGACAGAAAGTTGCAGAGGTTGAAAAATTAACGCAAACTGTGAGGGAGCTGGAGGAGGCTGTTCTTGCTGGTGGTGCAGCAGCAAATGCTGTGAGGGATTATCAACGCAAAGTTCAAGAGATGAATGAGGAAAGGAAAACTCTTGACAGAGAGTTGGCTCGTGCAAAGGTAACAGCCAACCGAGTGGCTGTTGTAGTAGCAAATGAATGGAAAGATGCAAATGATAAGGTTATGCCAGTAAAACAGTGGCTTGAAGAAAGAAGATTCTTGCAGGGAGAAATGCAGCAACTTCGTGATAAACTTGCTATAACCGAGCGAACTGCAAAGTCTGAAGCACAACTGAAAGAGAAGTATCAGCTGCGGCTCAGAGTGCTCGAAGAGAGTTTGAGAGGGTCTTCTGGTGGTAACAACCGAAGTACTCCAGAAGGGAGAAGCGTAAGCAATGGCCCCTCTCGTAGGCAATCTCTGGGTGGTGTTGACAACATCTCAAAATTAACTTCCAATGGATTTTTATCCAAAAGAACACCAGGTTCGCAGTTTAGATCTCCATCCTCAAGCAGCACGGTGTTGAAACATGCTAAAGGCACGTCAAAATCATTTGATGGAGGCACGAGGTCATTGGACCGAGGAAAGGTGTCATTAAATGGACTTCTACCCAGTTATTCATTCAATCAGTCCTGTGATGCAACCAAGGACGGTGAAGTAAGTAATGATTGGAAAAGTAATCCTGATGAAAAAGGAAATGAGTCTCCAACACTTGAGAGTGAAGACAGTGTTCCGGGGACGTTGTATGATTTACTTCAAAAGGAGGTTATAGCTTTGAGAAAAGCTGGTCATGAGAAAGATCAAAGCCTTAAAGACAAGGATGATGCCATTGAGATGTTAGCAAAGAAGGTAGAGACGCTGACCAAAGCAATGGAGGTTGAGGCAAAGAAGATGAGAAGAGAAGTGGCTGCCATGGAGAAGGAGGTAGCAGCTATGCGTGTGGAGAAAGAGCAAGAGAACAGGGCAAAGCGATTTGGTGGTAGCACTAAGGGTCCCGTTAGTGCAGCACAACTGCTTCCTGGAAGAAATGTTGGACGAGGTGGGTTGAATCGCAGCACGCAATAACAAGAAGCCGAATCTGCATTTGTGCAACCAAGTTTCCACATAGTTAATGATCTTTGTTCTTTTTTTACTCTATTCTATTTTCTTCCTGATGATTGATCATAGTAGTGTAACCCGCATGCCAATGACCTTGTGTCCGTTAGAATTGTTGCCAATATAGAAAGAGGAAAGATTTGGAAAGATGACGCTTCATGGGAAGGTAATTGGTAATGCATCTGACTTAGGATTGTCATCCCTCTGTTTAGAGATCAGTAAAAAAGGGGAGAAAGAAAAAGTTAAAAGGAAGAATAGTTGACTTGTTGGCTAACCATCTTCTGTCAGGTTTGTTTTTGAGTGAACCAGTGGTTGTGTGATTTGTATAGGTAGTCTCTCTACTTATTGGAATTTTTACTTTTGTTTCTTCTATTGTCACATTCAGTTGATATATGATATGATGTAATCTGCAATGAGTGTGTTGTTGGTTCAGGTATTGTTAATATATTCTTGTTATCACACCAAA 2800 43.39 MMAEISGDGGGFLPEVNNGRGVDSQATPTPITAPNPTPLTVSGSFKEGKSSSRRRTSVRPSMDADDFLNLLHGSDPVKVELNRLENEVRDKDRELGEAQAKIKALKLSERLREKAVEELTEELSRAEEKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALIDAERTVQSALAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAITERTAKSEAQLKEKYQLRLRVLEESLRGSSGGNNRSTPEGRSVSNGPSRRQSLGGVDNISKLTSNGFLSKRTPGSQFRSPSSSSTVLKHAKGTSKSFDGGTRSLDRGKVSLNGLLPSYSFNQSCDATKDGEVSNDWKSNPDEKGNESPTLESEDSVPGTLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVAAMRVEKEQENRAKRFGGSTKGPVSAAQLLPGRNVGRGGLNRSTQ 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17827788 17834390 + XM_039036619.1 Bhi07g00400 38789

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00400 633 Coils Coil 236 284 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 597 633 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 394 467 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 487 524 - -
Bhi07g00400 633 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 32 633 IPR009768 GO:0007010|GO:0008017
Bhi07g00400 633 Coils Coil 344 371 - -
Bhi07g00400 633 Coils Coil 560 601 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 497 516 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 393 471 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 20 47 - -
Bhi07g00400 633 Coils Coil 184 211 - -
Bhi07g00400 633 Coils Coil 295 322 - -
Bhi07g00400 633 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 32 633 - -
Bhi07g00400 633 Pfam Microtubule-associated protein 70 65 616 IPR009768 GO:0007010|GO:0008017
Bhi07g00400 633 Coils Coil 81 150 - -
Bhi07g00400 633 MobiDBLite consensus disorder prediction 1 61 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00400 - - - csv:101212718 1097.03
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00676 Bhi-Chr3:12871830 Bhi07g00400 Bhi-Chr7:17827788 1.11E-137 dispersed
Bhi03g00677 Bhi-Chr3:12871831 Bhi07g00400 Bhi-Chr7:17827788 5.88E-160 dispersed
Bhi03g02483 Bhi-Chr3:58959791 Bhi07g00400 Bhi-Chr7:17827788 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g500 . . . . . Bpe10g01001 Bma14g01927 Bma15g00026 Cmo04g01102 . Cma04g01029 Cma04g00077 Car04g00961 Car04g00073 Sed04g3001 . . Bhi07g00400 Tan04g1510 Cmetu10g0919 Lac13g1329 Hepe01g0590 . . Cla07g00538 Cam07g0579 Cec07g0638 Cco07g0604 Clacu07g0582 Cmu07g0618 Cre07g0954 . Cone19ag0733 Cone6ag0360 Cone9ag0390 Lsi04g01101 . . . Blo06g01031 . Bda07g01745 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g01255 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000868 2 2 0 4 3 3 5 3 3 2 2 2 5 1 2 6 3 6 5 3 2 1 2 3 3 2 2 6 2 2 87
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g00400 Bhi_Chr07 FPKM 9.349976 10.400435 8.523605 8.574774 16.229605 16.988611 16.720579 11.29529 10.981837 10.364061