Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi07g00436 | TTTTAGGCAATGAGCTGAATTAGTCGCATTTTTTGTTCCAATACGACTCGGCTTCCACGCGCCGCTCTCTTCTCCTCCACTATTACCTTCCATTTTCTCTTTCAATTCTCCATTTTTTTCCAAACCCATTTCTTCTTTTCTCGTTTCCTTCCCCAAATCTCACCGGCGACCCTCCGACCCATCTCCCTCCGCCGCCTTCTTCGGCTGTTATTTCCCCCGTTTCTCCTTCCCCATCATCCCAATTATTGTTTTCCTCTGGTGGGATTTCGAGGGGTCGATCGGTTTACCTTTTCAAACGAAGGGGAAGGTCGAAGATTAGGGCTTTTCGTCACTTGGGTCTCTCCCAAAATGGAGACTTCGCCTTCCAATTCCGATCCTTACTCCAATTCTTCTACACCCACAAGTACTGCTCGTACCTCCTCCAGATTTGGCCTCTCCCTCCCTTCCCTCAATTTCTTCCGTTCGCCTTTGTCTGTCATCTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCATCATGAATCCGAACCTGTAATCAACGCTGCTGCCACTCCTGATTTGCGGGTTTTTTCTCAAAATCACAATCACTTGATGCCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCACAACCTCTTCCGGTAATACTATCCCTTCTGGGGAGGTTTCTATAAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCCAGTAGCTTGTTGCCAAATCAAACTGGTTATGAGCAAAATGGTAGACTTGCTATTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCAACTGCTTCTTCATCTATTCAATCTGGAAATAGTCGCGTCGATGGAGAATCTGGAAATGGAATGGAAGAGGGTGTCAATAGAGATTCGTCTTACCAGAGATATGATATTCAGCAGGTTGCTAGATGGATTGAACAGATTCTTCCATTCTCTATACTATTGCTGATAGTCTTTATCCGTCAGCATTTAGAAGGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCGAATGATATTGTCAAGAAACAGACTGCTCTAAAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGAACCTCTATTACATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCATAGTGACGATCTTCTATTCCCATTAGTCATGCTTCCACCAAAGACAGTACCGCCTTTTTGGCATGCTTTGTTCATCATTTTGGTTAATGATACGATGGTGAGGCAGTTTGCAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGTCGGCAGTTCATGTTTCAGGGTCAAATTTTAACTCTCGTGGAATACACTCTTCTATTGTACCGTGCATTATTACCAACACCTGTATGGTACCGATTCTTTTTGAATAAAGATCAAGGGAGCCTCTTTTCATCACTGACAACAGGATTATATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTTGTTGCTGCATTTAAGGCTCTATCACGAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAATGCGGCGGGAGACCTTTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTCGAGAGAGAAAGAACTTGCCCTCTTTGCCGAGCACTGGTAAAGCCTGCAGAACTCCGTACATTTGGCGATGGGTCGACTAGCTTACTCTTCCAGTTGTTTTAGACGAAAATTTTCCATTTCCCGACATGACAAATCTATCAGTTTTAACAAAGAAAGATATCGAATATCGGAAGGGAACGGGGGGAAGAAGAAAAAGAAAAAAAGGGAAGAGAAGAAAAAAGAGGAAGAACGAGACATCCAGACAAGCCTGAAGATATTGTCAAATTCAAAACTGGATTAGTATTATATCAATGCCTTATGATCATTGTGATGAGTTAGATGTCCAAACAGAAGATGGATTTTAAATAAATCCCATTTCTTCATTGAATACAATGAAATCTAATTTTTTTTAACAGAAAAAAAGAGTTCCAACTGTGAAAACTGCATGCTATATGAGAATTGGGGGAGCAAAACTGTAATATTTAAAGATTATTATTCCCTGTAATTTAGGTCCGGAGAGGCTGCCAACACAGAAATGATTATTATGATTTTGATTTCTATGTCAAGTAATTGTTGTTCCAGAGAAAA | 2274 | 41.07 | METSPSNSDPYSNSSTPTSTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVHHESEPVINAAATPDLRVFSQNHNHLMPTSSSSSSSSSATTSSGNTIPSGEVSIRIIGSGEQDPSPSSLLPNQTGYEQNGRLAISGDQPESPDEERVPLVSTASSSIQSGNSRVDGESGNGMEEGVNRDSSYQRYDIQQVARWIEQILPFSILLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLFPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQFMFQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 19367817 | 19376755 | - | XM_039036205.1 | Bhi07g00436 | 38825 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi07g00436 | 486 | MobiDBLite | consensus disorder prediction | 79 | 183 | - | - | |
| Bhi07g00436 | 486 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 486 | - | - | |
| Bhi07g00436 | 486 | SUPERFAMILY | RING/U-box | 418 | 468 | - | - | |
| Bhi07g00436 | 486 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Bhi07g00436 | 486 | CDD | RING-HC_RNFT1_like | 424 | 463 | - | - | |
| Bhi07g00436 | 486 | PANTHER | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN | 1 | 486 | IPR044235 | GO:0061630|GO:1904294 | |
| Bhi07g00436 | 486 | ProSiteProfiles | Zinc finger RING-type profile. | 425 | 463 | IPR001841 | - | |
| Bhi07g00436 | 486 | Pfam | Zinc finger, C3HC4 type (RING finger) | 423 | 466 | - | - | |
| Bhi07g00436 | 486 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 399 | 472 | IPR013083 | - | |
| Bhi07g00436 | 486 | MobiDBLite | consensus disorder prediction | 154 | 172 | - | - | |
| Bhi07g00436 | 486 | ProSitePatterns | Zinc finger RING-type signature. | 440 | 449 | IPR017907 | - | |
| Bhi07g00436 | 486 | MobiDBLite | consensus disorder prediction | 79 | 108 | - | - | |
| Bhi07g00436 | 486 | MobiDBLite | consensus disorder prediction | 116 | 141 | - | - | |
| Bhi07g00436 | 486 | SMART | ring_2 | 425 | 462 | IPR001841 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi06g01721 | Bhi-Chr6:48514899 | Bhi07g00436 | Bhi-Chr7:19367817 | 1.40E-11 | dispersed | |
| Bhi06g01722 | Bhi-Chr6:48514899 | Bhi07g00436 | Bhi-Chr7:19367817 | 1.40E-11 | dispersed | |
| Bhi07g00436 | Bhi-Chr7:19367817 | Bhi02g01189 | Bhi-Chr2:27947317 | 1.72E-06 | dispersed | |
| Bhi07g00436 | Bhi-Chr7:19367817 | Bhi07g00437 | Bhi-Chr7:19367817 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi07g00436 | - | K22379 | csv:101207430 | 864.374 |