Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00437 TAGGCAATGAGCTGAATTAGTCGCATTTTTTGTTCCAATACGACTCGGCTTCCACGCGCCGCTCTCTTCTCCTCCACTATTACCTTCCATTTTCTCTTTCAATTCTCCATTTTTTTCCAAACCCATTTCTTCTTTTCTCGTTTCCTTCCCCAAATCTCACCGGCGACCCTCCGACCCATCTCCCTCCGCCGCCTTCTTCGGCTGTTATTTCCCCCGTTTCTCCTTCCCCATCATCCCAATTATTGTTTTCCTCTGGTGGGATTTCGAGGGGTCGATCGGTTTACCTTTTCAAACGAAGGGGAAGGTCGAAGATTAGGGCTTTTCGTCACTTGGGTCTCTCCCAAAATGGAGACTTCGCCTTCCAATTCCGATCCTTACTCCAATTCTTCTACACCCACAAGTACTGCTCGTACCTCCTCCAGATTTGGCCTCTCCCTCCCTTCCCTCAATTTCTTCCGTTCGCCTTTGTCTGTCATCTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCATCATGAATCCGAACCTGTAATCAACGCTGCTGCCACTCCTGATTTGCGGGTTTTTTCTCAAAATCACAATCACTTGATGCCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCACAACCTCTTCCGGTAATACTATCCCTTCTGGGGAGGTTTCTATAAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCCAGTAGCTTGTTGCCAAATCAAACTGGTTATGAGCAAAATGGTAGACTTGCTATTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCAACTGCTTCTTCATCTATTCAATCTGGAAATAGTCGCGTCGATGGAGAATCTGGAAATGGAATGGAAGAGGGTGTCAATAGAGATTCGTCTTACCAGAGATATGATATTCAGCAGGTTGCTAGATGGATTGAACAGATTCTTCCATTCTCTATACTATTGCTGATAGTCTTTATCCGTCAGCATTTAGAAGGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCGAATGATATTGTCAAGAAACAGACTGCTCTAAAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGAACCTCTATTACATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCATAGTGACGATCTTCTATTCCCATTAGTCATGCTTCCACCAAAGACAGTACCGCCTTTTTGGCATGCTTTGTTCATCATTTTGGTTAATGATACGATGGTGAGGCAGTTTGCAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGTCGGCAGGGTCAAATTTTAACTCTCGTGGAATACACTCTTCTATTGTACCGTGCATTATTACCAACACCTGTATGGTACCGATTCTTTTTGAATAAAGATCAAGGGAGCCTCTTTTCATCACTGACAACAGGATTATATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTTGTTGCTGCATTTAAGGCTCTATCACGAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGTAAATGCGGCGGGAGACCTTTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTCGAGAGAGAAAGAACTTGCCCTCTTTGCCGAGCACTGGTAAAGCCTGCAGAACTCCGTACATTTGGCGATGGGTCGACTAGCTTACTCTTCCAGTTGTTTTAGACGAAAATTTTCCATTTCCCGACATGACAAATCTATCAGTTTTAACAAAGAAAGATATCGAATATCGGAAGGGAACGGGGGGAAGAAGAAAAAGAAAAAAAGGGAAGAGAAGAAAAAAGAGGAAGAACGAGACATCCAGACAAGCCTGAAGATATTGTCAAATTCAAAACTGGATTAGTATTATATCAATGCCTTATGATCATTGTGATGAGTTAGATGTCCAAACAGAAGATGGATTTTAAATAAATCCCATTTCTTCATTGAATACAATGAAATCTAATTTTTTTTAACAGAAAAAAAGAGTTCCAACTGTGAAAACTGCATGCTATATGAGAATTGGGGGAGCAAAACTGTAATATTTAAAGATTATTATTCCCTGTAATTTAGGTCCGGAGAGGCTGCCAACACAGAAATGATTATTATGATTTTGATTTCTATGTCAAGTAATTGTTGTTCCAGAGAAAA 2259 41.17 METSPSNSDPYSNSSTPTSTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVHHESEPVINAAATPDLRVFSQNHNHLMPTSSSSSSSSSATTSSGNTIPSGEVSIRIIGSGEQDPSPSSLLPNQTGYEQNGRLAISGDQPESPDEERVPLVSTASSSIQSGNSRVDGESGNGMEEGVNRDSSYQRYDIQQVARWIEQILPFSILLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLFPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19367817 19376752 - XM_039036207.1 Bhi07g00437 38826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00437 482 MobiDBLite consensus disorder prediction 79 183 - -
Bhi07g00437 482 ProSitePatterns Zinc finger RING-type signature. 436 445 IPR017907 -
Bhi07g00437 482 ProSiteProfiles Zinc finger RING-type profile. 421 459 IPR001841 -
Bhi07g00437 482 MobiDBLite consensus disorder prediction 1 25 - -
Bhi07g00437 482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 395 468 IPR013083 -
Bhi07g00437 482 SUPERFAMILY RING/U-box 414 464 - -
Bhi07g00437 482 CDD RING-HC_RNFT1_like 420 459 - -
Bhi07g00437 482 Pfam Zinc finger, C3HC4 type (RING finger) 419 462 - -
Bhi07g00437 482 SMART ring_2 421 458 IPR001841 -
Bhi07g00437 482 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 482 - -
Bhi07g00437 482 MobiDBLite consensus disorder prediction 154 172 - -
Bhi07g00437 482 MobiDBLite consensus disorder prediction 79 108 - -
Bhi07g00437 482 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 1 482 IPR044235 GO:0061630|GO:1904294
Bhi07g00437 482 MobiDBLite consensus disorder prediction 116 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02255 Bhi-Chr3:49433025 Bhi07g00437 Bhi-Chr7:19367817 0 dispersed
Bhi07g00437 Bhi-Chr7:19367817 Bhi02g01189 Bhi-Chr2:27947317 1.82E-06 dispersed
Bhi07g00436 Bhi-Chr7:19367817 Bhi07g00437 Bhi-Chr7:19367817 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00437 - K22379 csv:101207430 870.152