Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00472 TTTCTAGATCTTTCATGGAATAATCCTCGTACACCAGCTACAGAGATGATCCAGATCCTCATATCACCATTACAAAGTAGTTGAACTTTACTTCTCTCTTTCTTTCTTCCTTCTTCTTTCTTTGATCTCTCTCTTTTTATCTATACTTTCCCTCTTGACCTTCTTTCTGGGCAATTTCGACCTTAAGTGAAGACCAGAGCATGCTTGAATGTCCAAAGAAAGAGAGAGATTTGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAGTATTCCTCCCCAACAAATTATGGGGAGAAGACACTCATTGCAGGGTCCTCCTGGAGCTCTCAACACCATTACTCCATGTGCAGCCTGCAAACTCTTAAGAAGAAGATGTGCTCAAGAATGCCCATTCTCCCCATACTTCTCCCCCCATGAGCCCCATAAATTTGCCTCTGTTCACAAGGTTTTCGGCGCTAGCAACGTCTCGAAGATGCTTATGGAAGTTTCCGAGAATCAAAGAGCGGATGCTGCAAACAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGCTGTATGGGCGCCATTTCAGCCCTACAACACCAAATTCAAGCTTTACAAGCTGAACTCAATGCAGTGAGAGCTGAGATTTTAAGACACAAATTAAGAGAAGCTAATAATATGATTCACTCTTCTCCTCAACAACAACATTTGCCTTTTCTTTCATCTTCTACGGAGGTCGTTTCGGTCGCTGTGCCACCACCGCCTCCGCCACCACCGCTACCTCCACCACCTCATCATGATGTTTCTTCTTCCTCCTCCTTGTACAACCGGCCGGCGGTGGCAGCCACGGCTGATTATAGTACTATCTCAAGTGATGAAAATATTGCCTACTTTGTTAGTACTTCTAGTACTACTCATCAATTGAATTCTTAGCATTATTATTGTAGGGTTTAAAGAAAGGCAATTTTACATGCAATAAG 987 42.55 MSKERERFDEIAKKIKRETDVSSSIPPQQIMGRRHSLQGPPGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRHKLREANNMIHSSPQQQHLPFLSSSTEVVSVAVPPPPPPPPLPPPPHHDVSSSSSLYNRPAVAATADYSTISSDENIAYFVSTSSTTHQLNS 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20663568 20665783 - XM_039037159.1 Bhi07g00472 38861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00472 243 MobiDBLite consensus disorder prediction 177 207 - -
Bhi07g00472 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 35 231 - -
Bhi07g00472 243 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Bhi07g00472 243 Coils Coil 128 155 - -
Bhi07g00472 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 231 - -
Bhi07g00472 243 Pfam Lateral organ boundaries (LOB) domain 49 146 IPR004883 -
Bhi07g00472 243 MobiDBLite consensus disorder prediction 182 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02264 Bhi-Chr4:62047280 Bhi07g00472 Bhi-Chr7:20663568 1.12E-81 dispersed
Bhi07g00472 Bhi-Chr7:20663568 Bhi08g00916 Bhi-Chr8:30291794 1.63E-48 dispersed
Bhi07g00472 Bhi-Chr7:20663568 Bhi10g00963 Bhi-Chr10:19755429 2.74E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1489 PF03195 LOB 2.20E-40 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00472 - - csv:101219425 410.223