Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00541 AATCCAAACGCCACTATAAATACCTTCTTCCCTTTCCCCTTTCCATTTCATCTTCTCAAAATTCGTTTCAATCAAAAATCGAATAAAGGCAAAAATATCAATATGTGCGCAGTTGCAGTACCGAAGACGACGATGACTCCATTGTTCTCATCTCCAAAGCTCTCTTCACTACTCTACAAATCCTCTTCTCTCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCGAAATCGTTGTCCAGTCCGAGAAATCTTCATGTTTCTGCATCGTCTTCCCCGTCGCCGTCCTCTGTGTCCCCTGTTGATACGGTTTTGAAGAGGAAGAGGCCGGCGAGAATTGATGTACCGCCGAGTATACCGATTGGATTTGGATTTGGAATATTCGAGACGCCGGAGGTTATGGAGGAGGAAGGAGAAGGATATTCGGTTTATTGTAAAAGAGGAAGAAGACGAATCAGCGCTATGGAGGATCGATTTTCAGTTACCGTCGGAAGTCAAGGATATTCTAAACAGGCTTTCTTCGGAGTTTTCGACGGACACGGTGGAGCAAGAGTGGCGGAAATCGCAGCGAAACGAATGAGCGAGAATGTAATCGATCAAGTAACGAGAAGAGCAGAATCGGAACTCGAGGAAGCAATCAAAGACGGCTATCTGAGGACGGATCGGGATGTATCGGAGGAAGGCGTGAGCGGCGGCGGCGCTTGTTGCGTCACTGCATTGATACGGAATGGAAATCTGGCAGTGTCGAACGTCGGCGATTGCCGCGCTGTGTTGAGTAGAAAGGGAAAAGCGGAAGCCCTAACCTCCGATCACCGGGCGGGAAGAGAAGACGAGAGAAATCGGATCGAAAAATCGGGCGGTTATGTAGATTGTTGCGGTGGTGGATGGAGAGTTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGATGAGCATCTGAAACAATGGGTGATATCGGCGCCGGAGACGAGAGTGATGAAGATTGACGATGATTGTCGTTTCTTGATTCTTGCTTCCGATGGTCTTTGGGACAAGGTTACAAACCAGGAAGCAGTAGACATAGTAGAGGCAATGTGCGGCGCGGAGATAATGAAGAAGAAACCAATTAATCCGTCGTTAATAATGTCGGCCTGCAAACAGTTGGTGTCATTGTCAACATCAAGAGGCTCAATCGACGATACCACTGTTATGATCATTAAACTAAATTCCCTTATTCATTCCTCTACCTCAAATCATCATTAATTAACCCCTAATTTTAAACTAATTAATAATTACCATTCACATTAATTAAGGACAAGAAGAAGTAAAATGAGGCCGGTCCGGTTTGGCAACTCAGAATTTTTGACATTTTCCTTGTCCAACAGTCAAAAACTCTTCAAACATAAACCTTCATTGAATAATTTTTATGTAATCTCTATACTTTTACATTTTATTTTGTTATTTGGTGACTCGGTACTCGGTTTCTGTTAAAGTTGTAGATTATATTACATTAATAAGTGGAACTCTCATCCACTTTTTTTTTTC 1530 43.33 MCAVAVPKTTMTPLFSSPKLSSLLYKSSSLNSSSSSSSSSSSSPKSLSSPRNLHVSASSSPSPSSVSPVDTVLKRKRPARIDVPPSIPIGFGFGIFETPEVMEEEGEGYSVYCKRGRRRISAMEDRFSVTVGSQGYSKQAFFGVFDGHGGARVAEIAAKRMSENVIDQVTRRAESELEEAIKDGYLRTDRDVSEEGVSGGGACCVTALIRNGNLAVSNVGDCRAVLSRKGKAEALTSDHRAGREDERNRIEKSGGYVDCCGGGWRVQGTLAVSRAIGDEHLKQWVISAPETRVMKIDDDCRFLILASDGLWDKVTNQEAVDIVEAMCGAEIMKKKPINPSLIMSACKQLVSLSTSRGSIDDTTVMIIKLNSLIHSSTSNHH 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22345874 22348630 - XM_039035870.1 Bhi07g00541 38930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00541 381 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Bhi07g00541 381 ProSiteProfiles PPM-type phosphatase domain profile. 108 369 IPR001932 -
Bhi07g00541 381 PANTHER PROTEIN PHOSPHATASE 2C 20 371 IPR015655 GO:0004722|GO:0006470
Bhi07g00541 381 SMART PP2C_4 101 367 IPR001932 -
Bhi07g00541 381 MobiDBLite consensus disorder prediction 28 71 - -
Bhi07g00541 381 SMART PP2C_SIG_2 128 369 IPR001932 -
Bhi07g00541 381 CDD PP2Cc 108 369 IPR001932 -
Bhi07g00541 381 Pfam Protein phosphatase 2C 121 360 IPR001932 -
Bhi07g00541 381 Gene3D - 99 373 IPR036457 -
Bhi07g00541 381 SUPERFAMILY PP2C-like 108 371 IPR036457 -
Bhi07g00541 381 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 20 371 - -
Bhi07g00541 381 MobiDBLite consensus disorder prediction 28 69 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00541 Bhi-Chr7:22345874 Bhi01g01463 Bhi-Chr1:29706750 5.61E-49 dispersed
Bhi04g02588 Bhi-Chr4:69516138 Bhi07g00541 Bhi-Chr7:22345874 1.69E-86 transposed
Bhi12g01821 Bhi-Chr12:58131783 Bhi07g00541 Bhi-Chr7:22345874 1.39E-16 transposed
Bhi07g00541 Bhi-Chr7:22345874 Bhi08g00470 Bhi-Chr8:16355090 1.34E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00541 K17506 - csv:101208170 554.673