Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00550 TTTCTTTCTTTTTACCCTTAAATCAGCTGAATAAAACCCCCATTTCTTCCATTCTTAGCATCTCAAATTCACCCTCCAATCGAGGCCTTCTCGATTTCTCTCTTTGTCGACGAGTCTTTTCAATCATTGAACCTGTTTCTTCCTTCAATTTATTTCCAGGAGCTGGATATGTGCAGTGGCTCTAAGAATAAAGTTGCTTCCTCGAATTCCGCCATGGAAGCTAGGTTTCTGAAGCTTAGTGATGGAGCTTTATTCTCTGCGAATTCAATCTTGCTTGAACTATCAGCCTCTGATGATGTAGAAGGGTTCAAGAGAGAGGTTGAAGAAAAGGATTTGGATGTTGATGAGCCAAGCTGCTGGTATGGAAGAGGAATTGGGTCAAAGAAGATGGGTTTTGAAGAAAGAACTCCACTGATGATTGCTGCCATGTTTGGAAGCTCCAAGGTTGTGAAGTACTTAATTGAGACAGGCAAGGTTGATGTCAACAGGGCTTGTGGTTCAGACTTGACCACTGCCCTTCACTGTGCCACTGCTGGTGGCTCTTGTTCTTCCCTTGAGACCATCAAGCTCTTGCTCGACGGATCTGCTGATGTCGATTGTGTCGACGCGTACGGGAGAAAACCTGTTGATTTGATTGTTTCAGCTTGCAGGATGGTGTTCAATTCAGGAAGAAAGGCTATGGAGATGTTGTTGAGAGGAGATGGTATGGCTGGGGAAGGTGATCTGAGTCTTTACCTTGAAGAAGACCAGCAAAAGATCACAGCTTCCCAGTCTACAAAAGAAGGAAGTGACAAGAAAGAGTATCCAGTTGATGTATCGCTGCCCGACATCAACAGCGGGATATACGGTACCGATGATTTCAGGATGTATACTTTCAAAGTGAAGCCTTGTTCCAGGGCATATTCACACGATTGGACTGAGTGCCCTTTTGTTCATCCTGGTGAGAACGCTAGGCGTAGAGACCCCAGGAAGTACCCATATAGTTGTGTTCCATGCCCTGAATTCCGGAAGGGGGCTTGTCCTAAGGGAGATTCCTGTGAGTATGCACATGGTGTTTTTGAGTCTTGGCTCCACCCTGCTCAATACCGAACCCGGCTTTGTAAGGATGAGACTGGCTGCACAAGGAAAGTCTGTTTCTTTGCTCACAAACCTGATGAGTTGCGCCCTGTATATGCATCAACAGGCTCAGGCATGCCCTCACCTAGGTCTCTTTCGAGCAGTGCCGCAGATATGTCTACCATGAGCCCATTGGCTCTTGGTTCATCATCGTTGTCGTTGCCAACTACCTCGACACCTCCTATGTCTCCCTTGGCATCAGTGTCTTCCCCTAAAAATGGGAACTTGTGGCAGAACAAGATTAACCTTACCCCTCCTGCTCTGCAGCTCCCTGGTAGTCGATTAAAGGCCACCTTGAGTGCAAGAGATTTGGATTTAGATATGGAATTGCTCGGGTTAGAAAAGAACGCGAGCCAATTACAACATCAACAACAGTTGATTGACGAGATAACCCGACTCTCCTCTCCTTCTTACTGGAGTGCAGATGTAAGCAGGAGTACAGAGTTGAAGCCAGCAAACCTCGATGACTTGTTTGGATCATTAGATTCTTCCTTATTGTCTCAGTTGCAAGGCGCTTCACTTAAAACGCCAATCTCAGCTCAAGTTCAATCTCCGACTGGGCTGCAGATGCGCCAAAACATAAACCAACTCCGGGCAAGTTACCCAACTAACCTATCATCCTCACCTGTAAAGAAACCCTCCTCTTTTGGCTTTGACTCATCAAGTGCAGTGGCAGCTGCAGTGATGAACTCAAGGTCTGCAGCCTTTGCAAAACGAAGCCAGAGTTTCATCGATCGAGCTGCAGTGTCCCGTCTTCCCGGGTACACTGGAGCTGCAAATTCTGCAGCTACAATGTCTTCCCATCTCTCAGATTGGAACTCACCCGACGGAAAACTAGACTGGGGAATACATGGCAACGATCTCAACAAACTCAAAAAATCTGCTTCCTTTGGGATCCGAAACAATGGCATGGGAACTCCCACGTTCACCCCACCAGTAGAGGAACCTGATGTCTCTTGGGTTAACTCCTTGGTCAAAGATGTGCCCTCTGAAAGCTTCGGGCTGTTCGGTGCCGAGAAGCGTCCATACAACCTCAAAAGAGAAATCAATGAGATGCTCCCGTCCTGGATGGAGCAGCAGTTGTATGCAGAGCAGGAGCAGATAGTTGCATAAGCAACACTTGCCAAAATCTCTCTTCATTATGCTAACAATATCAAGTTCTTCACATTTCATTCAATATTTGATTACAGAAACTAAAGTTTAAAGGTAGTAGTAAAAAGAGAATTGTTCTAGAGGCAATTCTACGTCAAAAAATGCCCTCAAGTTTCGGTATGGGGTCGATCAATCTTCAGACAGATCAGTAACAATCTATCTGATGATCAGATCAGTAATATATCTTTGTATTCTTTTCATTGTATTATATTATATTTGTTAATTTTTTTCTCCATTTTGGGGCTGATATAAGATGAATATGTATCATTTTCACTTTAGTATATTAATAAGAAAGACAATGTTTCCAATA 2578 44.65 MCSGSKNKVASSNSAMEARFLKLSDGALFSANSILLELSASDDVEGFKREVEEKDLDVDEPSCWYGRGIGSKKMGFEERTPLMIAAMFGSSKVVKYLIETGKVDVNRACGSDLTTALHCATAGGSCSSLETIKLLLDGSADVDCVDAYGRKPVDLIVSACRMVFNSGRKAMEMLLRGDGMAGEGDLSLYLEEDQQKITASQSTKEGSDKKEYPVDVSLPDINSGIYGTDDFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGACPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCTRKVCFFAHKPDELRPVYASTGSGMPSPRSLSSSAADMSTMSPLALGSSSLSLPTTSTPPMSPLASVSSPKNGNLWQNKINLTPPALQLPGSRLKATLSARDLDLDMELLGLEKNASQLQHQQQLIDEITRLSSPSYWSADVSRSTELKPANLDDLFGSLDSSLLSQLQGASLKTPISAQVQSPTGLQMRQNINQLRASYPTNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAFAKRSQSFIDRAAVSRLPGYTGAANSAATMSSHLSDWNSPDGKLDWGIHGNDLNKLKKSASFGIRNNGMGTPTFTPPVEEPDVSWVNSLVKDVPSESFGLFGAEKRPYNLKREINEMLPSWMEQQLYAEQEQIVA 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22592783 22595703 - XM_039036139.1 Bhi07g00550 38939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00550 686 MobiDBLite consensus disorder prediction 334 385 - -
Bhi07g00550 686 ProSiteProfiles Zinc finger C3H1-type profile. 270 297 IPR000571 GO:0046872
Bhi07g00550 686 MobiDBLite consensus disorder prediction 340 385 - -
Bhi07g00550 686 Pfam Ankyrin repeats (3 copies) 75 144 IPR002110 GO:0005515
Bhi07g00550 686 ProSiteProfiles Ankyrin repeat profile. 77 101 IPR002110 GO:0005515
Bhi07g00550 686 SMART ANK_2a 112 144 IPR002110 GO:0005515
Bhi07g00550 686 SMART ANK_2a 77 107 IPR002110 GO:0005515
Bhi07g00550 686 Gene3D - 30 173 IPR036770 -
Bhi07g00550 686 ProSiteProfiles Ankyrin repeat region circular profile. 77 101 - -
Bhi07g00550 686 Gene3D - 271 333 - -
Bhi07g00550 686 SUPERFAMILY Ankyrin repeat 68 158 IPR036770 -
Bhi07g00550 686 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 275 295 IPR000571 GO:0046872
Bhi07g00550 686 ProSiteProfiles Ankyrin repeat profile. 112 147 IPR002110 GO:0005515
Bhi07g00550 686 SMART c3hfinal6 305 328 IPR000571 GO:0046872
Bhi07g00550 686 SMART c3hfinal6 270 296 IPR000571 GO:0046872
Bhi07g00550 686 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 23 684 - -
Bhi07g00550 686 PANTHER UNKEMPT FAMILY MEMBER 23 684 IPR045234 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00550 Bhi-Chr7:22592783 Bhi11g02699 Bhi-Chr11:72342791 8.55E-167 dispersed
Bhi01g02573 Bhi-Chr1:63225403 Bhi07g00550 Bhi-Chr7:22592783 5.19E-51 transposed
Bhi10g00821 Bhi-Chr10:16609151 Bhi07g00550 Bhi-Chr7:22592783 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1498 PF12796 Ank_2 2.40E-09 CL0465 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00550 - - csv:101203102 1209.51