Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi07g00552 | CCAAAGCCAAAAACCAAAAGCAAAACACAACGATTCGTACAAGAGGTTCCAAGTTTATCGATGCTGCTCACTGGGCAGTGATCACTCCGATCTCTTCGACTTCTGCAAATTTCCATACCAATTTACTCCGTCACTCAAATGGCTTCAATCTCTTCTAGCCCTCGTTCCGTTGAAGACATCTTCAAAGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATTTGTGTTTATATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAACCTGCGTTGGGGATCAATTTTGCAAGAGATGGGATGAAGCGTAGAGACTGGCTTTCGTTGGTGGCTGTTCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGCAATGAGCGGAAGCGACTATTTAGTATGATCAATGATCTACCCACTCTATTTGAAGTTGCGTCTGGAAGGAAAGCTGTTAAAGACAAACCCAGCATGGATAGTGGAAGTAAATCCAGAAACAGCACAAAGAGGTCAGTAGATGGGTCGATCAGAAACAGCAATCCAAAGCTACTCGAAGAGAGTTATGGAGAGGATGAAGATGAGCACGGTGATACACTCTGTGGGAGCTGTGGTGGGAACTACAATGCAGACGAGTTTTGGATTGGATGCGACATCTGTGAGAGGTGGTTCCATGGAAAATGTGTGAGGATAACACCTGCCAAAGCAGAAAACATCAAGCAGTACAAATGCCCCTCTTGCAGCACGAAGAGAGGAAGACTGTAGCGCGCGGAAACACCTTAATGTAAAGCACATTTTGTGGGAGTTAACCTTTATGTGTCTTGGGAAAACTCTTGGTAAGGACCAAAAGAAGTGAAGGTACACACATGTTAGGGGATTTACTTGTGAGGGGTTTATAGGGGTTATAAAGTTAACATTCTAACGGATAAACAAGCATGAGTTGAAGTTAGTTTTCTTTTCGTTTTTTTTTCATACATGTTCGTCGTATAGTGTTCGGTGTTTAAAGATTGATCTCGTCTTCGTTTATAATGATATGAAATGATCTGATCGTTCATGCTA | 1158 | 44.21 | MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRLFSMINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRSVDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAKAENIKQYKCPSCSTKRGRL | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 22848955 | 22861263 | - | XM_039037156.1 | Bhi07g00552 | 38941 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi07g00552 | 241 | SUPERFAMILY | FYVE/PHD zinc finger | 176 | 238 | IPR011011 | - | |
Bhi07g00552 | 241 | MobiDBLite | consensus disorder prediction | 149 | 169 | - | - | |
Bhi07g00552 | 241 | ProSiteProfiles | Zinc finger PHD-type profile. | 185 | 237 | IPR019787 | - | |
Bhi07g00552 | 241 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 2 | 1 | 240 | - | - | |
Bhi07g00552 | 241 | ProSitePatterns | Zinc finger PHD-type signature. | 188 | 234 | IPR019786 | - | |
Bhi07g00552 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 177 | 236 | IPR013083 | - | |
Bhi07g00552 | 241 | SMART | PHD_3 | 187 | 235 | IPR001965 | - | |
Bhi07g00552 | 241 | MobiDBLite | consensus disorder prediction | 141 | 169 | - | - | |
Bhi07g00552 | 241 | CDD | PHD_AL_plant | 187 | 237 | IPR044104 | - | |
Bhi07g00552 | 241 | Pfam | PHD-finger | 188 | 236 | IPR019787 | - | |
Bhi07g00552 | 241 | Pfam | Alfin | 10 | 135 | IPR021998 | GO:0006355|GO:0042393 | |
Bhi07g00552 | 241 | PANTHER | CPG BINDING PROTEIN | 1 | 240 | IPR045104 | GO:0006355|GO:0042393 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi07g00552 | Bhi-Chr7:22848955 | Bhi11g01831 | Bhi-Chr11:52481651 | 1.46E-125 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1499 | PF12165 | Alfin | 2.10E-67 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi07g00552 | - | - | csv:101211934 | 500.745 |