Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00552 CCAAAGCCAAAAACCAAAAGCAAAACACAACGATTCGTACAAGAGGTTCCAAGTTTATCGATGCTGCTCACTGGGCAGTGATCACTCCGATCTCTTCGACTTCTGCAAATTTCCATACCAATTTACTCCGTCACTCAAATGGCTTCAATCTCTTCTAGCCCTCGTTCCGTTGAAGACATCTTCAAAGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATTTGTGTTTATATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAACCTGCGTTGGGGATCAATTTTGCAAGAGATGGGATGAAGCGTAGAGACTGGCTTTCGTTGGTGGCTGTTCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGCAATGAGCGGAAGCGACTATTTAGTATGATCAATGATCTACCCACTCTATTTGAAGTTGCGTCTGGAAGGAAAGCTGTTAAAGACAAACCCAGCATGGATAGTGGAAGTAAATCCAGAAACAGCACAAAGAGGTCAGTAGATGGGTCGATCAGAAACAGCAATCCAAAGCTACTCGAAGAGAGTTATGGAGAGGATGAAGATGAGCACGGTGATACACTCTGTGGGAGCTGTGGTGGGAACTACAATGCAGACGAGTTTTGGATTGGATGCGACATCTGTGAGAGGTGGTTCCATGGAAAATGTGTGAGGATAACACCTGCCAAAGCAGAAAACATCAAGCAGTACAAATGCCCCTCTTGCAGCACGAAGAGAGGAAGACTGTAGCGCGCGGAAACACCTTAATGTAAAGCACATTTTGTGGGAGTTAACCTTTATGTGTCTTGGGAAAACTCTTGGTAAGGACCAAAAGAAGTGAAGGTACACACATGTTAGGGGATTTACTTGTGAGGGGTTTATAGGGGTTATAAAGTTAACATTCTAACGGATAAACAAGCATGAGTTGAAGTTAGTTTTCTTTTCGTTTTTTTTTCATACATGTTCGTCGTATAGTGTTCGGTGTTTAAAGATTGATCTCGTCTTCGTTTATAATGATATGAAATGATCTGATCGTTCATGCTA 1158 44.21 MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERKRLFSMINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRSVDGSIRNSNPKLLEESYGEDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAKAENIKQYKCPSCSTKRGRL 241
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 22848955 22861263 - XM_039037156.1 Bhi07g00552 38941
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00552 241 SUPERFAMILY FYVE/PHD zinc finger 176 238 IPR011011 -
Bhi07g00552 241 MobiDBLite consensus disorder prediction 149 169 - -
Bhi07g00552 241 ProSiteProfiles Zinc finger PHD-type profile. 185 237 IPR019787 -
Bhi07g00552 241 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 2 1 240 - -
Bhi07g00552 241 ProSitePatterns Zinc finger PHD-type signature. 188 234 IPR019786 -
Bhi07g00552 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 236 IPR013083 -
Bhi07g00552 241 SMART PHD_3 187 235 IPR001965 -
Bhi07g00552 241 MobiDBLite consensus disorder prediction 141 169 - -
Bhi07g00552 241 CDD PHD_AL_plant 187 237 IPR044104 -
Bhi07g00552 241 Pfam PHD-finger 188 236 IPR019787 -
Bhi07g00552 241 Pfam Alfin 10 135 IPR021998 GO:0006355|GO:0042393
Bhi07g00552 241 PANTHER CPG BINDING PROTEIN 1 240 IPR045104 GO:0006355|GO:0042393
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00552 Bhi-Chr7:22848955 Bhi11g01831 Bhi-Chr11:52481651 1.46E-125 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1499 PF12165 Alfin 2.10E-67 No_clan Bhi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00552 - - csv:101211934 500.745