Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00554 AAACGGCTGCCAAACAAACACGGTGTTTTTAAGTCTTAAAGCTTTTTCTCCGTTCACCAGTTTCAGAGCTTCTTCTCCGGTGAAAATGGAAACAAATTCCAATTCCCCTTTCTCTCTTTCTCTCAAATTTCCTTTTCTTTTCGCCCTTTTTTCACTCTATAAACTCATTCCCTCTTCTTGATTTCCTCTCTCTCTCTTCAATTGGGTCTTTCCCTTTCTCTCTCCTCCGTTCATGGCTGTGACTCCCAATGAAGTACACCACACCACAACCCAACAAAACATCCCTCTCCTCTCTCTCTCCTCTCTTAAATGACGATTTTACCCTCTCCGCCCGTCGCCGTCGCCATCGTCGTCCTCACCCTGACCGCCGTCGTTTTCTCGCTCTTCCCGGCGATCGGAGCTCTTGGTTCTGCTTCTACCCTTGCCGTTAGCTACGGCTCCGGCACCGTCTGTGGCATCGTCGCCGAGCAGCCGACCCAAAGGATTTTGTGCTTCCGTAACGGTCAAACCATTTTTATTGAACCCCACATCTCTTTCTCCGCCGTATCCGGCGGCCGGCATACCTTCTGCGGTATAAGGACCGGCGGCTACACTCTGCTCTGTTGGGACTTTGACTCAACCACCGCTTTGTTTTCCCGGAGAAGACTCTACTACAACCCCGCCGTTCTTCTCGAGAATCTCGCGGTCGGCGACGAGCAAATCTGTGCTACGGTGATTGGCGCCGGCAATGTAACATGCTGGCGAGAAGGTAACAACGCGAGAAGTGGATTTTCTTCTCTTCAATATGATTCAATCTCTTCTGGGTATGGATTTTCTTGTGGGATTTTGAAAGGGAATCAATCTGTTCGATGTTGGGGTAGAAATTCGTCGATTGCAACCGAAATCGAAAATGGGTTTCGAAATATTTCAATGTTGAGCATCGTCGCCGGTGGATTTCATGCGTGTGGATTGAATTTCTCTGGTGGGTTAGTTTGTAAAGGGAATAACGATTTTGGGCAGTTGGATTTTCCTTCAAATTCATCCATGGGGTTCTCTGAATTATCACTCGGTGAACGCCATAGCTGTGGGATTTTGATCTCGAATCGGTCGGTGATTTGTTGGGGAGGTTCGGGATTTTCTGTTGATTCGGTTAAAGAAACTTCTTTTGAGTTAATTTCTTCAGGATCTGACTTTGTTTGCGGTTTAACAACGAGTAATTTCTCTGTTCTTTGTTGGGGACCTGGTTGGTCTAATAATTCTTTTGGTATTTCTTCACTTTCTCTTCCTAAGATTCTTCCTGGTCCTTGTGTTCAATCTTCTTGTAGTGATTGTGGGATTTATCCTTTATCTCAAACCCTCTGTTCTAATTCTGGGAATGTCTGTAATCGCTGTTTGTCTACTGTTTCAACGCCGCCGCCACCGTTACCGTCGCCTCCCCCTCCTCAGCGGTCGCTACCACCAACGGTGACGACCCCGTCGCCTCCGCCGGCTGCCTTGAGAAAGGGTTTGTTGGCATTTGGTATTGTGGGCTCAGTTGGGGCCTTTGCTGGGATTTGCACTATTGTTTACTGTTTGTGGACTGGTGTTTGTTTTGGGAATAAGAAGATACATAACTCTGTTCAGCCCACCATCACTAGAGCTGCTAGTTCAAATGGCGGAACGACGACGTCGAACACGAACAACAGCCCTCCGTCGAGATCGTCGACGATACGACGTCAAGGCTCACGGATAATGCGAAGGCAGAGGAGTGGTACCTCGTCTAAGCACGCGGATAGAGCAGAAGAATTCACTCTAGCTGAGCTTGCTATGGCTACGAATGATTTCTCTCCTGATAACAAGATTGGTGAGGGGAGCTTCGGCATCGTGTACCGAGGGAAACTATACGATGGTCGGGAAGTTGCGATTAAGAGAGGCGAAACGGGGCCGAAAACTAAGAAGTTTCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTGGCATTCTTGTCTAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTACTGTGAGGAGAAAGATGAGAGGTTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTATAATCATCTTCATGACAAGAACAACTCTGACAAAGCCAGTAGTGTTGTAAATTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCATAACTATGCAGTCCCTCCCATAATCCACAGAGATATTAAATCATCCAACATTCTCCTCGACGCGAATTGGACAGCGAGAGTATCTGATTTCGGGTTGTCATTGATGAGTCCAGGGTCGGATCGTGATTATCGACCGACAAAGGCTGCTGGGACTGTTGGTTATATTGATCCTGAGTACTATGGACTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGAGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTCAAGGATGATGAACAAGGAGGGACACCAGTGAGCGTGGTCGATTACGCGGTGCCTGTGATTATGGTCGGAGAATTGGTGAAGATTTTAGATCAGAGAGTCGGGCCACCGCAGATCAATGAAGCGGAGGCGGTGGAGCTGGTGGCTTACACGGCGATGCATTGTGTGCATTTGGAAGGGAAAGATCGGCCAACGATGACCGACATTGTCGCTAATTTGGAGCGAGCTTTGAATCTTTGTGATGATAGCCATGGTAGCATCTCTAGTGGTGGAATTTCCATTGTTTCAGAGTGAAAAATTCTTCAAACACAAGAAAATTTCCAGAGACAAAAATTTTGAGCTGTTCTTCATTGTTTTTTTTCTCTTTTCTTTCTTTATCATTCTTTGTGGGTACACTCTTGGTGTAAAAAAGTAGAGATTTTTCCATCTAACATTGGTCCCAACTAACATCACTTTTATTTTTCA 2904 45.9 MTILPSPPVAVAIVVLTLTAVVFSLFPAIGALGSASTLAVSYGSGTVCGIVAEQPTQRILCFRNGQTIFIEPHISFSAVSGGRHTFCGIRTGGYTLLCWDFDSTTALFSRRRLYYNPAVLLENLAVGDEQICATVIGAGNVTCWREGNNARSGFSSLQYDSISSGYGFSCGILKGNQSVRCWGRNSSIATEIENGFRNISMLSIVAGGFHACGLNFSGGLVCKGNNDFGQLDFPSNSSMGFSELSLGERHSCGILISNRSVICWGGSGFSVDSVKETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNNSFGISSLSLPKILPGPCVQSSCSDCGIYPLSQTLCSNSGNVCNRCLSTVSTPPPPLPSPPPPQRSLPPTVTTPSPPPAALRKGLLAFGIVGSVGAFAGICTIVYCLWTGVCFGNKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSSTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELAMATNDFSPDNKIGEGSFGIVYRGKLYDGREVAIKRGETGPKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNSDKASSVVNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMSPGSDRDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTPVSVVDYAVPVIMVGELVKILDQRVGPPQINEAEAVELVAYTAMHCVHLEGKDRPTMTDIVANLERALNLCDDSHGSISSGGISIVSE 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22980532 22983435 + XM_039036580.1 Bhi07g00554 38943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00554 807 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 11 803 - -
Bhi07g00554 807 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 11 803 IPR044815 GO:0004674
Bhi07g00554 807 Pfam Regulator of chromosome condensation (RCC1) repeat 203 230 - -
Bhi07g00554 807 Pfam Regulator of chromosome condensation (RCC1) repeat 161 186 - -
Bhi07g00554 807 MobiDBLite consensus disorder prediction 436 462 - -
Bhi07g00554 807 SUPERFAMILY Protein kinase-like (PK-like) 479 783 IPR011009 -
Bhi07g00554 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Bhi07g00554 807 SUPERFAMILY RCC1/BLIP-II 43 266 IPR009091 -
Bhi07g00554 807 MobiDBLite consensus disorder prediction 361 384 - -
Bhi07g00554 807 Gene3D Transferase(Phosphotransferase) domain 1 579 796 - -
Bhi07g00554 807 MobiDBLite consensus disorder prediction 436 481 - -
Bhi07g00554 807 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Bhi07g00554 807 SMART serkin_6 498 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi07g00554 807 Gene3D - 66 336 IPR009091 -
Bhi07g00554 807 Gene3D Phosphorylase Kinase; domain 1 459 578 - -
Bhi07g00554 807 ProSiteProfiles Protein kinase domain profile. 498 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi07g00554 807 Pfam Protein kinase domain 501 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00554 Bhi-Chr7:22980532 Bhi07g01853 Bhi-Chr7:50370590 3.29E-69 dispersed
Bhi01g02684 Bhi-Chr1:66547247 Bhi07g00554 Bhi-Chr7:22980532 2.69E-103 transposed
Bhi04g02190 Bhi-Chr4:60201087 Bhi07g00554 Bhi-Chr7:22980532 4.67E-136 transposed
Bhi07g00554 Bhi-Chr7:22980532 Bhi08g00477 Bhi-Chr8:16805670 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87875 PF00069 Pkinase 2.20E-44 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00554 - - bhj:120081574 1502.65