Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00570 GCCCAGTACATTCACCCATTGTCGCCGTTGGCCAGCGGAGGTCCAAAGCAACACCGATCATGGTGTGTGATGTCAGATGTGTTGCTTGCGACAGCTACGTCTAACCAACGAACGATAATCAATTTCAATCCAATGCCTTGATTTTCCACTACCACCGCCATCGGCAAATGGCTTCCGTATATCGTGATCGGACGTCGGAATTTCGGTCACTGTCGGAGACGTTAAAGAAGTTCGGCGGAGCCACAGCAGCCGTCAATCCAGCTCAAAATGAACCATCGGCGTCTACGCCCTCCGGATCACCGGCCTTCGCACGATCAGAATTCAGCAAAAAGGCCTCCCGCATCGGATTGGGAATCCAAGAAACCTCTCAGAAGATCGTGAGACTTGCTCAGTTGGCGAAAAGATCATCAATGTTTGATGACCCAATCAGGGAAATACAGGAAATGACTGCTTTGATTAAAAACGATATTACATCCTTGAACGTAGCTATCACAGACTTGCAAACCATCCAAAACATGGAGACAACAGAGGGGAATTATTCAGAGGATAGAGTGATTCATTCAACAGCTGTCTGTGATGACCTGAAGAGCAGACTGATGGGAGCTACAAAACAGCTTCAAGATGTGCTAACTACAAGAACAGAGAACATCAAGGCCAATGAGAGCCGGAGACAAATATTTTCTGCAAATGCAACAAGAGAACTTCCTTTTCAAAGTCAAGCCAAAACTGTAACTCAACCTCCACCTTGGTCAAGTAATACATCTGGAAATGCCCAATCATCCTTGTTGTCATCAAATGGAGCTCAAGTTGGGGGTCAATTGAGACGAAGGTTAGCTGTGGAGAACATGAACACCCCATCACAGCAAATGGAGATATCAATGTTACAGCAGGTGGTTCCTAGGCAGGAAAATTATTCACAAAGTCGTGCAGTTGCGCTCCATAATGTGGAGTCTACCATATCAGAACTCAGTGGTATTTTCACACATCTTGCCACAATGGTAGCACATCAAGGAGAACTTGCTATCAGGATTGATGACAACATGGATGAATCATTGGCAAATGTAGATGGTGCTCGGAGTGCTCTTTTAAGGCATCTTAACCAGATATCATCGAATAGATGGCTTCTTATAAAAATATTTGCCATTTTAATAATTTTCTTGATGATCTTTATTTTCTTGGCATAAATTTCAGCTCCCAAACCTAACAAAATTTTTCCGATGATATTGTGTGGCTTCCATTATGGGGTTCTATTAAGTTTATCATGTACATGAATGCAACAAGTTGCTTATATTTTTACAGAAAGAAGCATCTATTGTATTGTGGGAATTTGGATCAAATTCCTGCTTGGGATTACAAATTCTATCTCAAATTCGTTAAAGTTGAA 1384 42.49 MASVYRDRTSEFRSLSETLKKFGGATAAVNPAQNEPSASTPSGSPAFARSEFSKKASRIGLGIQETSQKIVRLAQLAKRSSMFDDPIREIQEMTALIKNDITSLNVAITDLQTIQNMETTEGNYSEDRVIHSTAVCDDLKSRLMGATKQLQDVLTTRTENIKANESRRQIFSANATRELPFQSQAKTVTQPPPWSSNTSGNAQSSLLSSNGAQVGGQLRRRLAVENMNTPSQQMEISMLQQVVPRQENYSQSRAVALHNVESTISELSGIFTHLATMVAHQGELAIRIDDNMDESLANVDGARSALLRHLNQISSNRWLLIKIFAILIIFLMIFIFLA 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23407561 23410704 - XM_039035491.1 Bhi07g00570 38959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00570 338 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
Bhi07g00570 338 Gene3D - 48 302 - -
Bhi07g00570 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Bhi07g00570 338 MobiDBLite consensus disorder prediction 30 47 - -
Bhi07g00570 338 SMART tSNARE_6 242 309 IPR000727 -
Bhi07g00570 338 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi07g00570 338 PANTHER SYNTAXIN 4 337 IPR045242 -
Bhi07g00570 338 SUPERFAMILY t-snare proteins 49 302 IPR010989 GO:0016020|GO:0016192
Bhi07g00570 338 PANTHER SYNTAXIN-31 4 337 - -
Bhi07g00570 338 MobiDBLite consensus disorder prediction 181 211 - -
Bhi07g00570 338 Pfam SNARE domain 284 335 IPR000727 -
Bhi07g00570 338 CDD SNARE_syntaxin5 250 325 - -
Bhi07g00570 338 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01047 Bhi-Chr4:25961373 Bhi07g00570 Bhi-Chr7:23407561 4.42E-102 dispersed
Bhi07g00570 Bhi-Chr7:23407561 Bhi09g00594 Bhi-Chr9:12782574 2.44E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00570 K08490 - csv:101213786 576.244