Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00626 ACTCTCTACTTGTTGGTAAACAACTTTAGGTTACCAAAATGCTTCTCCAAAATTCCCCCTCTGTATATTCCAATCCAATTCAAACCCCATTTTATTACTGCATTTCACTTCCACTTCCTTAATTTCCACTTCTGATCTTCCTCATTCCAAATCCGAAATCCCAATCCTCTCCGCCGCGCCGTCCGCCATGAGAATAATCTCTCCGCCTTCTGCTTCTTATTCTTCTTCTTCCTCTTCCTCTTCCTCCTGCGTCGGCTCCGATTCCGGCATTCACAACAACAATCTCGCCGCCGCTCTTCACCGTCCGCAATCCGAGAAAACCAGAGCCAAACGGCGGAGGAGGAATCAAGACGAAACTAAATGCCAGATTCATAATCATAACGCCAATGGAATCAACAACGCTGCCGCCTCTTCCGCTCGCCGGAGCTCCATTTACAGAGGAGTCACTAGGCACCGATGGACCGGCCGGTTCGAAGCTCATCTTTGGGACAAGAGTTCATGGAATAACATTCAGAACAAAAAAGGAAGGCAAGTTTATTTGGGAGCTTACGATAACGAGGAAGCCGCTGCCCGAACATATGACCTTGCTGCCCTCAAATACTGGGGACCCGGAACCACTCTCAATTTCCCGGTAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTTTCAAAGGAGGAATATTTGGCGTCGTTAAGGCGGCGGAGCAGTGGCTTTTCAAGAGGCGTTTCTAAGTACCGCGGCGTGGCCCGCCACCACCATAATGGCCGGTGGGAGGCTCGGATTGGCCGTGTTTTTGGAAGCAAATATCTTTATTTGGGAACTTACAACACACAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCAATTGAATACAGAGGAGCCAATGCAGTGACCAACTTTGACATTAGCAATTACATTGGAAGATTAGAGAACAAATCATCAGTTCTTCAAGCAACAGAGCAAACAGAGGAGCCTAATTACTCCCCTGCTTCTTCTGAGGGAGAAGTAGTACAACAACAACAGGATCAACAACAGCAGCAGCAACAACAACAACAAACGACATTCTCGGGTCCACCGGACCTTCAGTTCTCGATCGAGAACAACCCAGGGCTGGTTGTCATGGACGAACCACCGACACAAGACGATCATGATCTCCATTGGTCTTTTTTAGACACAGGATTATTCGTGCAGGTCCCTGACCTCCCACTTGAGAAATCGAATGAATTGGCCGACCTCTACTTCGATGAGATCGAGTTCGAGGACGACATTGGATTGATATTCGAAGCGAGCTTAGAGAACAAGAACTGTGAGGGCAATAATAATAATAATAAAGAAGATGATCATAATAATAATAATAATAAGAATAATGTTGGGAAGATGGAGGTGAACTGCAGTGAGAAAATCAGATTGTTCTCAACAACAACTTCACCATCTTCTTCTTCATCAATAACCACCTCGGTTTCGTGTGAATTTAGGGTTTGACAATTTAGATTTTGAGGGTTTGTTGTTGTTGTTGAAGAGTGGATGGGAAATGGGGAAAAAAAAATCAAAA 1562 45.39 MRIISPPSASYSSSSSSSSSCVGSDSGIHNNNLAAALHRPQSEKTRAKRRRRNQDETKCQIHNHNANGINNAAASSARRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKGRQVYLGAYDNEEAAARTYDLAALKYWGPGTTLNFPVESYTNEMEEMRKVSKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIGRLENKSSVLQATEQTEEPNYSPASSEGEVVQQQQDQQQQQQQQQQTTFSGPPDLQFSIENNPGLVVMDEPPTQDDHDLHWSFLDTGLFVQVPDLPLEKSNELADLYFDEIEFEDDIGLIFEASLENKNCEGNNNNNKEDDHNNNNNKNNVGKMEVNCSEKIRLFSTTTSPSSSSSITTSVSCEFRV 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24817937 24822490 - XM_039036947.1 Bhi07g00626 39015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00626 434 MobiDBLite consensus disorder prediction 378 399 - -
Bhi07g00626 434 CDD AP2 183 244 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 MobiDBLite consensus disorder prediction 258 304 - -
Bhi07g00626 434 SUPERFAMILY DNA-binding domain 81 150 IPR016177 GO:0003677
Bhi07g00626 434 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 9 424 - -
Bhi07g00626 434 SMART rav1_2 82 154 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 SMART rav1_2 184 248 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 MobiDBLite consensus disorder prediction 1 38 - -
Bhi07g00626 434 SUPERFAMILY DNA-binding domain 183 244 IPR016177 GO:0003677
Bhi07g00626 434 Pfam AP2 domain 82 140 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 Pfam AP2 domain 183 234 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 MobiDBLite consensus disorder prediction 1 78 - -
Bhi07g00626 434 ProSiteProfiles AP2/ERF domain profile. 82 148 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bhi07g00626 434 MobiDBLite consensus disorder prediction 60 78 - -
Bhi07g00626 434 Gene3D AP2/ERF domain 82 150 IPR036955 GO:0003700|GO:0006355
Bhi07g00626 434 Gene3D AP2/ERF domain 183 244 IPR036955 GO:0003700|GO:0006355
Bhi07g00626 434 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 PRINTS Ethylene responsive element binding protein signature 224 244 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 ProSiteProfiles AP2/ERF domain profile. 184 242 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 MobiDBLite consensus disorder prediction 414 434 - -
Bhi07g00626 434 MobiDBLite consensus disorder prediction 258 307 - -
Bhi07g00626 434 CDD AP2 82 149 IPR001471 GO:0003700|GO:0006355
Bhi07g00626 434 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00626 Bhi-Chr7:24817937 Bhi11g03021 Bhi-Chr11:82199153 2.76E-98 dispersed
Bhi11g02892 Bhi-Chr11:77840867 Bhi07g00626 Bhi-Chr7:24817937 1.68E-60 dispersed
Bhi07g00626 Bhi-Chr7:24817937 Bhi03g01071 Bhi-Chr3:21679247 1.27E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1505 PF00847 AP2 8.60E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00626 - - csv:101206349 645.195