Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00768 TACTTAGAATAATTAACTAACAAGTTTAGAATGCAAAATACAAGTAATGAAGGGAGACTTTGTAAAGAGAAAGAAAAAAAAAGGAAAAACAAAGGAAGGAGCTTTGTGTTATCTTTTAAATCAGCTTCTTCCTTTGCAAATCACATCTCTTCTTAGCCATTTCAAATTTCTTCCTTTAATGAACATGAACCAAAAACCCTAAAACCCACCAAGAAAGTAACCTTTTTTTTTAAAAAAAAAAGGCCCCCCTTTTTTATTTGTTTCTTATAATTATTATTTTAATTGTGGGTTTATTATAAAAACACACCCACCATTTTCTCTTTTTCTACAAAATTAGGCTCTCTTAGCAGCCATGTTCTTGTTGATATCTTTGTTTGAAAACAGTCTCTTTTTCTTCGATTAATACCACAGAACAGCACGGTCAGAAACATCCTCAAATTCCTCATTGTACTTTTGAGGATGTTTCCTGTTCTTGCCATTCTCTTCGTATGGATGTCTGCTTCAATCTTTGGTTTCGCTTCTGGTTCTTTCAATCTTACATTACCCCATCAGCATCCTGACCCTGATTCTGTTGCTGATGAACTTCAAAGAACAGTGAATGCATCTGTATGGAGAAGAAAAATGCTGTCCATCGAATCAAAGGATCAAACTTTCTCTTGTCTCACCGGAAACCCCATAGACGATTGCTGGCGGTGCGATCCGAATTGGGCGGCGAACCGGCAGCGACTGGCCGACTGCGGTATTGGGTTCGGGCGCGACGCCATGGGCGGCAAAGGTGGCAAGATCTACATCGTTACGGACTCGTCTGATTTGGATCCGGCGAACCCTACTCCGGGCACTCTCCGGCACGCTGTGATCCAATTCGAACCACTGTGGATCATCTTCTCTGCCGACATGACTATCAGGCTGAAATATGAACTTATCATTAACAGTTTCAAAACGATCGACGGCCGTGGCGCCAACGTCCACATCACCGGCGGCGGATGCATCACCATTCAATACGTGTCTAATGTCATCATCCACAACGTCCACGTGCACCACTGTAAACCCTCCGGCAATGCCAACATAAGATCGACCCCAACTCACGTGGGCCATCGAGGGTTGTCAGACGGAGATGGGATATCAATATTCAGCTCAAGAAAGATATGGATTGATCATTGTTCATTGTCATACTGCACGGATGGACTAATAGACGCAATAATGGGATCGACAGGAATAACAATATCAAACAGCTACTTCTCGCACCATGACGAGGTGATGTTATTGGGGCATGATGATCGGTACGTACAAGACTCGGGGATGCAAGTCACCATTGCCTTCAACCACTTCGGTGAAGCATTGGTCCAACGCATGCCCCGTTGTAGACATGGCTACATTCATGTCGTCAACAATGATTTCACTGCTTGGGAAATGTATGCCATTGGAGGCAGTGCTCAACCCACTATTAATAGTCAGGGTAATCGTTACACCGCTCCCGTAGACCCTAATGCCAAAGAGGTGACAAGACGTTTAGACGCGGCGGAGACGGAGTGGGCAGGGTGGAATTGGCGGACAGATGGCGATATTTTGGTGAACGGCGCGTTTTTTGTACCTTCCGGTGCCGGACTTAGCACCCAGTACGGTAAGGCTTCCAGCGTGGAGCCTAAGTCCGTGGCTCTCATCAATCAACTCACTATGAACGCCGGCGTTTTGGGCGCCCCCAGGTATAATACTGGTCAAGGAATTGTATATCCAGGATTTAATGGTGAGAATGGTGGAAATGGTGATGAGGGATATGGGGGTAATACTGTCATAAATAATAGTCCAATTTATGAAAATGGTGGTGCTAATGGTAATGATGACTACTACGGAATGATATTTAAAGCTAATGGTCATAGAGTATTACCATTATTGCCCTCCATAAACTTATGTACTCAAATTATAATACTTTTGTATATAGTCACAAATTATAGTGGTCTATTCACAATATAGAAAATGTAAAAGAGTTTTAGAAAGCTCATATAATTAATTAAATTAAGTTTAATTAA 2027 42.62 MFPVLAILFVWMSASIFGFASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRKMLSIESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNTGQGIVYPGFNGENGGNGDEGYGGNTVINNSPIYENGGANGNDDYYGMIFKANGHRVLPLLPSINLCTQIIILLYIVTNYSGLFTI 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28247294 28254399 + XM_039037172.1 Bhi07g00768 39157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00768 503 Gene3D - 70 412 IPR012334 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 93 110 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 117 142 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 153 169 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 217 238 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 297 316 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 319 338 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 361 385 IPR018082 -
Bhi07g00768 503 PRINTS Pollen allergen Amb family signature 390 413 IPR018082 -
Bhi07g00768 503 SUPERFAMILY Pectin lyase-like 61 389 IPR011050 -
Bhi07g00768 503 PANTHER PECTATE LYASE 18-RELATED 10 429 IPR045032 GO:0030570
Bhi07g00768 503 Pfam Pectate lyase 154 334 IPR002022 -
Bhi07g00768 503 SMART amb_all 145 342 IPR002022 -
Bhi07g00768 503 PANTHER PECTATE LYASE 10 429 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01624 Bhi-Chr3:34322094 Bhi07g00768 Bhi-Chr7:28247294 1.23E-50 dispersed
Bhi04g01308 Bhi-Chr4:33216534 Bhi07g00768 Bhi-Chr7:28247294 0 dispersed
Bhi07g00768 Bhi-Chr7:28247294 Bhi12g01517 Bhi-Chr12:49105909 0 dispersed
Bhi07g00767 Bhi-Chr7:28247064 Bhi07g00768 Bhi-Chr7:28247294 0 tandem
Bhi07g00768 Bhi-Chr7:28247294 Bhi07g00769 Bhi-Chr7:28247296 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00768 K01728 - csv:101205739 931.013