Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00769 CTTAGAATAATTAACTAACAAGTTTAGAATGCAAAATACAAGTAATGAAGGGAGACTTTGTAAAGAGAAAGAAAAAAAAAGGAAAAACAAAGGAAGGAGCTTTGTGTTATCTTTTAAATCAGCTTCTTCCTTTGCAAATCACATCTCTTCTTAGCCATTTCAAATTTCTTCCTTTAATGAACATGAACCAAAAACCCTAAAACCCACCAAGAAAGTAACCTTTTTTTTTAAAAAAAAAAGGCCCCCCTTTTTTATTTGTTTCTTATAATTATTATTTTAATTGTGGGTTTATTATAAAAACACACCCACCATTTTCTCTTTTTCTACAAAATTAGGCTCTCTTAGCAGCCATGTTCTTGTTGATATCTTTGTTTGAAAACAGTCTCTTTTTCTTCGATTAATACCACAGAACAGCACGGTCAGAAACATCCTCAAATTCCTCATTGTACTTTTGAGGATGTTTCCTGTTCTTGCCATTCTCTTCGTATGGATGTCTGCTTCAATCTTTGGTTTCGCTTCTGGTTCTTTCAATCTTACATTACCCCATCAGCATCCTGACCCTGATTCTGTTGCTGATGAACTTCAAAGAACAGTGAATGCATCTGTATGGAGAAGAAAAATGCTGTCCATCGAATCAAAGGATCAAACTTTCTCTTGTCTCACCGGAAACCCCATAGACGATTGCTGGCGGTGCGATCCGAATTGGGCGGCGAACCGGCAGCGACTGGCCGACTGCGGTATTGGGTTCGGGCGCGACGCCATGGGCGGCAAAGGTGGCAAGATCTACATCGTTACGGACTCGTCTGATTTGGATCCGGCGAACCCTACTCCGGGCACTCTCCGGCACGCTGTGATCCAATTCGAACCACTGTGGATCATCTTCTCTGCCGACATGACTATCAGGCTGAAATATGAACTTATCATTAACAGTTTCAAAACGATCGACGGCCGTGGCGCCAACGTCCACATCACCGGCGGCGGATGCATCACCATTCAATACGTGTCTAATGTCATCATCCACAACGTCCACGTGCACCACTGTAAACCCTCCGGCAATGCCAACATAAGATCGACCCCAACTCACGTGGGCCATCGAGGGTTGTCAGACGGAGATGGGATATCAATATTCAGCTCAAGAAAGATATGGATTGATCATTGTTCATTGTCATACTGCACGGATGGACTAATAGACGCAATAATGGGATCGACAGGAATAACAATATCAAACAGCTACTTCTCGCACCATGACGAGGTGATGTTATTGGGGCATGATGATCGGTACGTACAAGACTCGGGGATGCAAGTCACCATTGCCTTCAACCACTTCGGTGAAGCATTGGTCCAACGCATGCCCCGTTGTAGACATGGCTACATTCATGTCGTCAACAATGATTTCACTGCTTGGGAAATGTATGCCATTGGAGGCAGTGCTCAACCCACTATTAATAGTCAGGGTAATCGTTACACCGCTCCCGTAGACCCTAATGCCAAAGAGGTGACAAGACGTTTAGACGCGGCGGAGACGGAGTGGGCAGGGTGGAATTGGCGGACAGATGGCGATATTTTGGTGAACGGCGCGTTTTTTGTACCTTCCGGTGCCGGACTTAGCACCCAGTACGGTAAGGCTTCCAGCGTGGAGCCTAAGTCCGTGGCTCTCATCAATCAACTCACTATGAACGCCGGCGTTTTGGGCGCCCCCAGGTAA 1705 45.22 MFPVLAILFVWMSASIFGFASGSFNLTLPHQHPDPDSVADELQRTVNASVWRRKMLSIESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPANPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCITIQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPR 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28247296 28251082 + XM_039037174.1 Bhi07g00769 39158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00769 415 Gene3D - 70 412 IPR012334 -
Bhi07g00769 415 Pfam Pectate lyase 154 334 IPR002022 -
Bhi07g00769 415 SUPERFAMILY Pectin lyase-like 60 388 IPR011050 -
Bhi07g00769 415 PANTHER PECTATE LYASE 10 413 - -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 93 110 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 117 142 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 153 169 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 217 238 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 297 316 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 319 338 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 361 385 IPR018082 -
Bhi07g00769 415 PRINTS Pollen allergen Amb family signature 390 413 IPR018082 -
Bhi07g00769 415 PANTHER PECTATE LYASE 18-RELATED 10 413 IPR045032 GO:0030570
Bhi07g00769 415 SMART amb_all 145 342 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00767 Bhi-Chr7:28247064 Bhi07g00769 Bhi-Chr7:28247296 0 dispersed
Bhi07g00769 Bhi-Chr7:28247296 Bhi12g01517 Bhi-Chr12:49105909 0 dispersed
Bhi07g00768 Bhi-Chr7:28247294 Bhi07g00769 Bhi-Chr7:28247296 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00769 K01728 - csv:101205739 822.772